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Protein Overview: SPAC23H4.08

General Information:
Name(s) found: SPAC23H4.08 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • RNA polymerase II associated protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 277 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    DNA-directed RNA polymerase II, holoenzyme [ISSLink to PubMed article]
    Biological Process: chromatin remodeling [ISS]
    transcription from RNA polymerase II promoter [ISSLink to PubMed article]
    general transcription from RNA polymerase II promoter [ISS]
    gene-specific transcription from RNA polymerase II promoter [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLPVLRVKR KASEDPVNAL YLELGNNPNS VSSTKRRKFA GRYYFKLSQT LKQDDRYIQI  60
   61 NDESSEPTHE DVRNIHSHTK ISSLKKNNYG IPVVQTSEDV VKAPTHMDLG SRENTKGILS 120
  121 FSSPRYTIQN LPSTQSNRVF DAIRVEQGHT TYHPHPQLDS MIQEYLSNGD LPLQQSTEDY 180
  181 VYDIYEASSK EPNKPTFAYG VIDALSIPDA FRSSLEQELV SETVDSDKDD PLHDEIDEDS 240
  241 NAESFYQNSY PDEDEWQDSS ENDEFAYSDD AEQDFYD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] deduced N/A No confident structure predictions are available.
    2 View Details [171..277] MSA 2.013997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle