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Protein Overview: SPBC2G2.13c

General Information:
Name(s) found: SPBC2G2.13c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • deoxycytidylate deaminase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 348 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: pyrimidine nucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    dCMP deaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTVGLTGPL CSGKDAVVEY LETKHGFNAI FRLPQLNEDG EYIYRTGDLV LGSVDDLISY  60
   61 LTPRWRERFV INGIHSPRLL SALLKRPFFL LVYIDAPIML RFNRYKTYVI LQCQHVVANF 120
  121 KFIVIILHAM CSVYSSLANT TLEEFCSIQD AAAFQSDNAG TRHRALANLL INNDSNIKLH 180
  181 LWEKLQKADL LNPNRFRPSW DSYFMEMASL AAKRSNCMKR RVGCVLVRGN RVIATGYNGT 240
  241 PRGATNCNEG GCPRCNSASS CGKELDTCLC LHAEENALLE AGRERVGNNA ILYCDTCPCL 300
  301 TCSVKITQLG IKEVVYHTSY NMDSHTASLL QAAGVQLRQY IPPENSIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..195] FFAS03 2.59 SUBSTRATE SPECIFICITY AND ASSEMBLY OF CATALYTIC CENTER DERIVED FROM TWO STRUCTURES OF LIGATED URIDYLATE KINASE
    2 View Details [196..348] PSI-BLAST 33.69897 No description for 2hvvA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.35750064574034 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.05874829607695 bayes_pls_golite062009
  • catalytic activity
    		•  0.942640875796745 bayes_pls_golite062009
  • hydrolase activity
    		•  0.799258945993812 bayes_pls_golite062009
  • DNA binding
    		•  0.694429305067015 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.319052597844854 bayes_pls_golite062009
  • protein binding
    		•  0.262528335081572 bayes_pls_golite062009
  • CTP synthase activity
    		•  0.227154659921775 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  0.205823354338506 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.144773327806905 bayes_pls_golite062009
  • nucleotide binding
    		•  0.140809536790465 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.134373265505829 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.134362467171752 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.00206249447427331 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle