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Protein Overview: SPBC19G7.02

General Information:
Name(s) found: SPBC19G7.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • 4-amino-4-deoxychorismate lyase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 231 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: L-phenylalanine metabolic process [RCALink to PubMed article]
    tyrosine metabolic process [RCALink to PubMed article]
    para-aminobenzoic acid biosynthetic process [ISSLink to PubMed article]
    folic acid biosynthetic process [IEA]
    tryptophan metabolic process [RCALink to PubMed article]
    Molecular Function: 4-amino-4-deoxychorismate lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEESNLFETT LYDGELFLLP SHLQRMKASA KSLGYSWPGE QYIENKLREA VQDTSMARVR  60
   61 WELSKAGDVT VQIVPIQTLE KAPYTLILDK QPSSTEKNPS CINKMTNRAI YIEAMNRNDA 120
  121 QYSKAQDVLL YNHQGFVTEA TIFNVAFHRN GQWITPSLKH GLLSGTMRKN LLENGSIHED 180
  181 DKGLLQKDNL KNGEQVLLFN SFRKVCKGVL IIQPEKACEL LKKKDSSEKL S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..231] PSI-BLAST 59.30103 Branched-chain aminoacid aminotransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.42233634542616 bayes_pls_golite062009
  • branched-chain-amino-acid transaminase activity
    		•  2.23160645596458 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  2.21952141862344 bayes_pls_golite062009
  • transaminase activity
    		•  2.19756519502252 bayes_pls_golite062009
  • transferase activity
    		•  1.87055521105017 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.88298371550629 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.88298371550629 bayes_pls_golite062009
  • cofactor binding
    		•  0.0813158351261423 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle