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Protein Overview: npl4

General Information:
Name(s) found: npl4 / SPBC1711.10c [Sanger Pombe]
Description(s) found:
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  • gi|7630168|emb|CAB88240.1| Cdc48-Ufd1-Npl4 complex component Npl4 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|74625350|sp|Q9P780.1|NPL4_SCHPO RecName: Full=Nuclear protein localization protein 4 [NCBI NR]
  • gi|19112675|ref|NP_595883.1| Cdc48-Ufd1-Npl4 complex component Npl4 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • Cdc48-Ufd1-Npl4 complex component Npl4 [Sanger Pombe]
  • Nuclear protein localization protein 4 OS=Schizosaccharomyces pombe GN=npl4 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE NUCLEAR PORE PROTEIN: Q9P780; [pompepVF.fasta]
  • Putative nuclear pore protein [pompep4896]
  • |||Cdc48-Ufd1-Npl4 complex component (putative) [pompepnew.fasta]
  • SPBC1711.10c protein [4896.FASTAC]
  • |||Cdc48-Ufd1-Npl4 complex component (putative)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative nuclear pore protein [Schizosaccharomyces pombe]gi|7630168|emb|CAB88240.1| SPBC1711.10c [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • |||Cdc48-Ufd1-Npl4 complex component |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9P780) Putative nuclear pore protein [pompep4896_normal_reversed]
  • |npl4||Cdc48-Npl4-Ufd1 complex component Npl4 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC1711.10c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC1711.10c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |npl4||Cdc48-Ufd1-Npl4 complex component Npl4 |Schizosaccharomyces pombe|chr 2|||Manual [spombe-190209-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 545 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    perinuclear region of cytoplasm [IEA]
    nuclear membrane-endoplasmic reticulum network [ISSLink to PubMed article]
    Cdc48p-Npl4p-Ufd1p AAA ATPase complex [ISS]
    cytosol [IDALink to PubMed article]
    endoplasmic reticulum [ISSLink to PubMed article]
    Biological Process: ER-associated protein catabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILRFRSKRG MARAEFQPTD TLAMLSAKIL SDILKNDYSP ENVSLCQNES DQGVIFSNLN  60
   61 DQTLQDAGLT HGQMLYLRLG TPNSDIASSN NEPALTVTGA PKQVSTPDVS EKKPSMPVIQ 120
  121 DPIDDSLEKE DGLIRRSMTS LCRHGPKGMC DYCSPLEPYD ESYRQENKIK HLSFHAYLRK 180
  181 INSNVNKYAS SQSFIPPLEE PSFTVKEKCP SGHPPWPAGI CTKCQPSTVM LNLQPFRVID 240
  241 HIEFASPGIV DSFLNKWRQS GFQRIGYTYG HFEQYNNVPL GIKGVIEAIY EPPQVSEADG 300
  301 VTLEEWADEA LVEQVATACG LRRIGIIFTD LTDDGSNSGK VLCKRHSDSY FLSSLEVYNS 360
  361 ANFQTKFKNP CKWSRSGYFG SKFVTSVISG NLNGEIEVMS YQVSNIGTAL YQADLIQPSV 420
  421 DPDRMLVKKE DQTRYVPDVL YRYTDKYGKQ VSENAKPAFP VSFLLVTLTD GFPEKPDPLF 480
  481 SNNDTSIITT LESTDETGRL RQLAKLFDHN AIANGSLSNF SVLLAIAKLS ILGKVSIIIY 540
  541 FFYMY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 17.0 No description for 2pjhA was found.
    2 View Details [141..191] deduced N/A No confident structure predictions are available.
    3 View Details [192..483] FFAS03 2.89 No description for 2og4A was found.
    4 View Details [484..545] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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