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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: npl4
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILRFRSKRG MARAEFQPTD TLAMLSAKIL SDILKNDYSP ENVSLCQNES DQGVIFSNLN  60
   61 DQTLQDAGLT HGQMLYLRLG TPNSDIASSN NEPALTVTGA PKQVSTPDVS EKKPSMPVIQ 120
  121 DPIDDSLEKE DGLIRRSMTS LCRHGPKGMC DYCSPLEPYD ESYRQENKIK HLSFHAYLRK 180
  181 INSNVNKYAS SQSFIPPLEE PSFTVKEKCP SGHPPWPAGI CTKCQPSTVM LNLQPFRVID 240
  241 HIEFASPGIV DSFLNKWRQS GFQRIGYTYG HFEQYNNVPL GIKGVIEAIY EPPQVSEADG 300
  301 VTLEEWADEA LVEQVATACG LRRIGIIFTD LTDDGSNSGK VLCKRHSDSY FLSSLEVYNS 360
  361 ANFQTKFKNP CKWSRSGYFG SKFVTSVISG NLNGEIEVMS YQVSNIGTAL YQADLIQPSV 420
  421 DPDRMLVKKE DQTRYVPDVL YRYTDKYGKQ VSENAKPAFP VSFLLVTLTD GFPEKPDPLF 480
  481 SNNDTSIITT LESTDETGRL RQLAKLFDHN AIANGSLSNF SVLLAIAKLS ILGKVSIIIY 540
  541 FFYMY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle