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Protein Overview: SPCC4G3.15c

General Information:
Name(s) found: SPCC4G3.15c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • CCR4-Not complex subunit Not2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 176 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    CCR4-NOT core complex [ISSLink to PubMed article]
    Biological Process: RNA elongation [ICLink to PubMed article]
    nuclear-transcribed mRNA poly(A) tail shortening [ISSLink to PubMed article]
    regulation of transcription from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: 3'-5'-exoribonuclease activity [ISSLink to PubMed article]
    transcription regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLESLLPIIR MEDSEMSTLQ LGCDLAALGF DLAPVEEDRL ISTNLFSPWA ELNTKKPVSQ  60
   61 PMFKLPACYK NVNPPPAISK IFQFSDETLF YIFYTMPRDV MQEAAAQELT NRNWRFHKEL 120
  121 RVWLTPVPGM KPLQRTPQFE RGYYMFFDPI HWKRIKKDFL LMYAALEDRA QSAVHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] Pfam 71.259637 No description for PF04153.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle