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Protein Overview: SPBC1773.13

General Information:
Name(s) found: SPBC1773.13 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • aromatic aminotransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 481 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: aromatic amino acid family metabolic process [ISSLink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEA]
    aromatic-amino-acid:2-oxoglutarate aminotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRNSEDFSH HLSRESKARE KGPFQMLGRI KSSTGIDAIS FSSGLPHPNK FAIRELSIKF  60
   61 PQLGCFKEEN GTYAKEVNVT FNIKADPSEG LLNFSQSLQY GQCQGISELV GFIKEHIRRI 120
  121 HAPRYENWDI KMSNGNTSGL EYCLRLLVNY GDHVLTEKYT YPAAITAMRA LGVQFVSVDM 180
  181 DSEGMLPESL EEIMRDWDIS LGPRPHVLYT VPTGQNPTGS TLSLSRRKKL LALARKYDII 240
  241 IVEDEPYYFL QMEDYNGSLN PAQQKCDGST FLKSLVPSLL SLDTEGRVLR LDSFSKLIAP 300
  301 GTRLGYITGN SMFIDHITRI AEVCTESPSG ICQSVLYAML HNWGQEGFCA WLQELQYSYT 360
  361 VRRNAFLNVA NKYLPNSVCI YHVPRAGLFL WVELNLNHYR FSDTKKSVSQ IEMEIFLALV 420
  421 EKGVKTVCGQ FFMANPERST KIFFRFAYSI ADFEDFEEGI KRFTSVINEH FNVESRVRIC 480
  481 P

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..481] PSI-BLAST 75.39794 a Human Kynurenine Aminotransferase II Homologue from Pyrococcus horikoshii OT3

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 4-aminobutyrate transaminase activity
    		•  2.50008459801306 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.08143587519879 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • DNA binding
    		•  1.56461875678714 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.39741122443159 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • kynureninase activity
    		•  1.27354164393136 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transcription factor activity
    		•  1.23644059117074 bayes_pls_golite062009
  • binding
    		•  1.09053123792737 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
    		•  0.942545094747784 bayes_pls_golite062009
  • hydrolase activity, acting on acid carbon-carbon bonds
    		•  0.845816961387768 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.619695949258279 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  0.54326874956263 bayes_pls_golite062009
  • structural molecule activity
    		•  0.347975812448725 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • aromatic-amino-acid:2-oxoglutarate aminotransferase activity
    		•  0.0916183433120769 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle