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Protein Overview: pep3

General Information:
Name(s) found: pep3 / SPCC790.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • ubiquitin-protein ligase E3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 900 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    HOPS complex [ISSLink to PubMed article]
    Biological Process: vacuole organization [ISSLink to PubMed article]
    vesicle docking [ISSLink to PubMed article]
    late endosome to vacuole transport [ISSLink to PubMed article]
    vacuole fusion, non-autophagic [ISSLink to PubMed article]
    protein targeting to vacuole [ISSLink to PubMed article]
    Golgi to endosome transport [ISSLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    zinc ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAEDWIDP NSSEDSDIQE DAELEYTADN PEKEQRGVFS LEKVQLQFPV SIRCLAVENN  60
   61 ILVMALTSDK LMIVDLERPE DIIDIELPKK VLALGLTYKI FLDPSGHYIF VTTTAGDNCL 120
  121 FTPSHQGRVL TKLKGHTVEA VQWNLNGGNI LELLIASKSG VLLELVLTLD SANLKRIEKS 180
  181 INTLYSFPFM ESPMGILKNI QDDSMTIVTN KRILRFEPKT SRGKDQLYFS PAFQGSMKEI 240
  241 LSFSEEETAQ CFSYSPFPKN LAEPYTLALK TSKRIIYLDI MNPVNPDIQD YEFNESPKLS 300
  301 VPTVEMNMIL TSFHLAFLDL DTLYIVNRVN GKESYQQRVN LSPHEEILGL CCDHEKNTYW 360
  361 LYTTDSLHEL VVNNETREAS LVFLEKGDFE KALECANTAK VRNTVLVGYA EFLMEHEEYE 420
  421 RAATLYAETL KSVEEVALKF IELNQKDVLR LYLWKKLRSY KSTMKIQKSL LVNWLLELML 480
  481 AKLNSLDEKE RLELFPENVM QQRQQVQREF STLLNQYKDE INREAAYNLA NNYGKEEQLL 540
  541 QIATVMKDQS YIMHYWVQRE NYEKALETLN EGVSQETLIQ HATALLTHRP NETVSIWERQ 600
  601 TDLDVHALIP SLLSYNQRSH VPVEENAAIR YLRYVTGVLG CVDPSIHNTL FCIYACHSSS 660
  661 NESYLMNYIE QQGNHPLYDM DLGIRLCLQF NCRRSAVKIL VLMKLYSQGV ELALEADDCE 720
  721 LAATIANIPE EDVVLKKTLW QTIAKYMFSK KSGIKETLRF LENSEVLQLP ELIRLLPEDI 780
  781 KLDDLSDNVC DELDHCMKRI EQLDFEIGQA SEVAHEIQTN AENMRNRYIV LEPNESCWHC 840
  841 NQPLFSEPFV LFPCQHAFHR SCMLEKTYKL ASEKNILKEC QLCGPSYAVR LINEPFSTDF 900
  901

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] PSI-BLAST 70.0 Clathrin heavy-chain linker domain; Clathrin heavy-chain terminal domain
    2 View Details [225..827] PSI-BLAST 92.69897 Clathrin D6 Coat
    3 View Details [828..900] PSI-BLAST 3.522879 No description for 2ecnA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle