YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: btn1

General Information:
Name(s) found: btn1 / SPAC607.09c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • battenin CLN3 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    fungal-type vacuole membrane [IDALink to PubMed article]
    integral to endoplasmic reticulum membrane [ICLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: cellular response to heat [IMPLink to PubMed article]
    vacuole organization [IMPLink to PubMed article]
    membrane raft distribution [IMPLink to PubMed article]
    late endosome to vacuole transport [IMPLink to PubMed article]
    regulation of cytokinesis [IMPLink to PubMed article]
    basic amino acid transport [ISSLink to PubMed article]
    vacuolar acidification [IGILink to PubMed article][IMPLink to PubMed article]
    endocytosis [IMPLink to PubMed article]
    actin cortical patch localization [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKLRLTKDA KVGCCFLIFG LLNNLLYVII LSAALDLVGA NVSKGVVLLS NIVPSLACKL  60
   61 SASILHVHKF KFAKRIGFCV FMSILGMQWI AWSSSVPSKM LGVSLAAISS SFGEISFLHL 120
  121 SSRYHSVSLP CWSSGTGLAG LFGASSYLVM TTWFNFSVRS TLIISSFLPL FLLIMYFFVL 180
  181 PESESTSPSI NNNYTPIESI DLRAGHVSFN FVNSLKQTFI FMQPYLLSHM FPQFLVYFSE 240
  241 YTINIGVAPT LLFPPEKAGF SSFRDFYPTY QTVYQIGVFL SRSSISFFTV PYLRTLAITQ 300
  301 FIILLFTILQ SALYLTSSYH FVLFLIFVEG LIGGTVYVNV YHSLQTTESS QRELAISTVG 360
  361 SSDSSGIFLA SLVSLFLEPS LCHFQADRGR DWCALT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] FFAS03 1.26 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  3.82096685159505 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.34396155292818 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.32643461660963 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.2506965512085 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.05049771748124 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.02370427376594 bayes_pls_golite062009
  • binding
    		•  1.9065830290222 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.62538016506437 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.46819549608723 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.869150152038001 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.339747214378126 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.339747214378126 bayes_pls_golite062009
  • symporter activity
    		•  0.327558013224678 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.327558013224678 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  0.273403673499648 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  0.273403673499648 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.222664452597504 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle