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Protein Overview: SPBP8B7.05c

General Information:
Name(s) found: SPBP8B7.05c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • carbonic anhydrase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 244 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    Biological Process: generation of precursor metabolites and energy [RCALink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    carbon utilization [IEA]
    Molecular Function: zinc ion binding [IEA]
    carbonate dehydratase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDRLKRRIE EIDHQDEIID REASTASPVS GAGKIDQNGE IKDLLERNLT WSQQTSRKYP  60
   61 SFFTATKDIQ TPQVLWIGCS DSRVPETTIL NLLPGEVFVH RNIANVVPRS DINALAVMEY 120
  121 SVTVLKVKHI IVCGHYGCGG VAAALGPNLN NLLDHWLRHI RDVIEDNREE LDAIEDPQLR 180
  181 RLKLAELNTR AQAISVTRVG FVREAMEKRG LQVHGWIYDL SNGQIKKLDI TDAIKKAKYG 240
  241 TYDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..244] PSI-BLAST 65.221849 beta-carbonic anhydrase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • carbonate dehydratase activity
    		•  2.96380803089124 bayes_pls_golite062009
  • catalytic activity
    		•  1.85658156053797 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  1.691366175135 bayes_pls_golite062009
  • hydro-lyase activity
    		•  1.65497918079842 bayes_pls_golite062009
  • lyase activity
    		•  1.62374861994341 bayes_pls_golite062009
  • binding
    		•  1.32962036184517 bayes_pls_golite062009
  • protein binding
    		•  0.132818074687599 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle