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Protein Overview: str1

General Information:
Name(s) found: str1 / SPBC4F6.09 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • siderophore-iron transporter Str1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: membrane [TASLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: cellular iron ion homeostasis [ICLink to PubMed article]
    transmembrane transport [RCALink to PubMed article]
    siderophore-iron transport [IMPLink to PubMed article]
    iron assimilation by chelation and transport [TASLink to PubMed article]
    Molecular Function: siderophore-iron transmembrane transporter activity [IMPLink to PubMed article]
    iron ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKSFSTTL DTLRRRFNDS SSEEDKLEKN IQDETSIKEV SLQDAKQSDE KGVEEKVFND  60
   61 ESFSIDVAPK PEDELSGIVK ARYLTEHSSR ISFYICYFSI FLLFFAISFQ AECYYSLTAY 120
  121 ATSAFAGHSL LSTIAVANNI ISAAIKPPLA RLSDVFGRLE AFLFSLLLYL VGLILMAAST 180
  181 NVQTYAGGSV LYNAGYTGVE LIMTIFMADT SSMANRSLVL GISYLPFVVT IWIGPRVAQE 240
  241 FYMHSTWRWG IAVWTILIPA CSIPFLAVYS YYQFRAWREG ALKGTLTINP VELFKKLDII 300
  301 GLILMTAGLA LVLLSISLAS YDTGKWSDAK FIVMIIIGGL CLIAFVLYEI FVASFPALPF 360
  361 RLMREPTIGA CCAMSFLFYI TFYCWDNYYY SFLQVVHYTS ITAAGYISYT YSFTSCATGF 420
  421 FLGILIRLTK RYKWYFVASI PVYILGQGLM IRYRGEQYNW GYQIMPQIIV GIGGGVIANL 480
  481 LTVAVQTVVS TENFAIVTAL VSTVTPIGGA VGSAISGAIW NSVMPKRLEK NLPSDLKDQA 540
  541 YTIFESLTVQ LSYTRGTDAR NAIILSYSEV QKILTSVATG FAGAMIFPVW FVANPRLSTV 600
  601 KTHIFDSKES KV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..612] PSI-BLAST 25.30103 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.31967711223954 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.26757615356623 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  1.24023641504332 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle