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Protein Overview: mrpl3

General Information:
Name(s) found: mrpl3 / SPBC3B9.14c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • mitochondrial ribosomal protein subunit L3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrial large ribosomal subunit [ISSLink to PubMed article]
    Biological Process: mitochondrial translation [RCALink to PubMed article]
    RNA processing [ISSLink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: ribonuclease III activity [ISSLink to PubMed article]
    structural constituent of ribosome [ISSLink to PubMed article]
    double-stranded RNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFISRSTTT FRRSISMKDY ARVRWYSNSG KSLIENILSS KIAISKVYTL KKRIGLPESY  60
   61 PMKVLVQALI DKTVVQNPQY SNEKLWSIGK VFGDFYVLEY IKCKYPRLPE EAVHGMQNGW 120
  121 MGSKALSQLA TIWGLEVQRR EEGLQESFGK VLAKRADPEM LRKPGEIYKD EAARRAILAI 180
  181 LGGVYLHQGF NDTKKFINDH ILSKQLDPRT MLQLQWPRRQ LSRLCKRLSL KEPVYRIIAE 240
  241 TGRKSREPVF VIGAYSGHHL LGQGQASSLN LAEQQAAYNS LISYYIHSPP FRQLPSDYLE 300
  301 VNDGKIPKAS EPYTSIPLVS HGQLVI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..326] PSI-BLAST 51.39794 RNase III endonuclease catalytic domain; RNase III, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  6.7575603459566 bayes_pls_golite062009
  • structural molecule activity
    		•  6.24187874355454 bayes_pls_golite062009
  • RNA binding
    		•  5.07736605479017 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.45216687077957 bayes_pls_golite062009
  • binding
    		•  2.27335967900422 bayes_pls_golite062009
  • endoribonuclease activity
    		•  1.62086478301433 bayes_pls_golite062009
  • double-stranded RNA binding
    		•  1.46317494664076 bayes_pls_golite062009
  • DNA binding
    		•  0.770826702436345 bayes_pls_golite062009
  • protein binding
    		•  0.736755095770059 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.661231648959158 bayes_pls_golite062009
  • mRNA binding
    		•  0.404665180963566 bayes_pls_golite062009
  • single-stranded RNA binding
    		•  0.35650576095599 bayes_pls_golite062009
  • RNA helicase activity
    		•  0.0112094156505713 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle