YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC17G6.05c

General Information:
Name(s) found: SPAC17G6.05c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • Rhophilin-2 homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 775 amino acids

    Gene Ontology:
    Cellular Component: endosome [ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    vacuole [RCALink to PubMed article]
    Biological Process: protein targeting to vacuole during ubiquitin-dependent protein catabolic process via the MVB pathway [ISSLink to PubMed article]
    ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLATPFFY LNKKETKHSD WVEPFTTFVS RIYGNSVDVE DQIKAFNTLR ENAADVDDTV  60
   61 AGKDILYSYY GQLDYLSFRF PTGGNGINIS FEWSDILDPD ADFVKQSSLA FEKASVLFNL 120
  121 VSLLSRMAAN HASAYTVDDY KAAANCLQCA SGIAKLLRES FIHAPGRDLD SNFLLGIYNL 180
  181 FLGQAQECVL GHMSFSASDS NMNYSLAAKI ASSAATLYDS CVHAFESMEP ACNPNFIRLA 240
  241 SAKKAALEGF SSYFMARAQL EKSKQGLAIG YLQQAKSILS SAQKLFNGIK LSTDFIHKPS 300
  301 LSDYPQTIST FIKSSLSHLL KTAEKDNDFV FHDLVVKEVE LPKISPLQAL PPLPLEKLYG 360
  361 SQDGFETAKK IVGDDLFKAF VPSAVTTASS LYSEETAKVF RAEQAEVERQ NTQMATVFAS 420
  421 LDLSRLQEIT HSDSKTNFIP KELIEARSQL ISFNPTFKIH ELFAKSTKLK QIIAKIKSDL 480
  481 EVEANENAKM KAKLGPSWTL SDSLEFAAPY QSELNNYLKT LAEASATDSA ISQQYALVKD 540
  541 DVETLCNSSK ISALLESSIS STDNSGQSLL DIPIEQEEQE RDMKIQLDLL EELQSRVQKL 600
  601 VPERQTTLQA LQQKCLQDDI SESLMQNSKR KDSALDTNQL FELELKKFDP LRNRLHASYR 660
  661 QQQLLLNEMR NVTQKLKQNP EFLRKMEVYN NQFSKNKELC SNLLSSSLTA KAISEGVSKG 720
  721 LEYYKTVEQR LAEINKTLGE QLLLRRKQGA TCLSKLSSSS SSHTSISSNM RNLHI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..312] FFAS03 7.98 Structure basis for endosomal targeting by the Bro1 domain
    2 View Details [313..433] PSI-BLAST 6.69897 Tropomyosin
    3 View Details [434..775] PSI-BLAST 11.154902 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle