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Protein Overview: SPAC20G8.09c

General Information:
Name(s) found: SPAC20G8.09c [Sanger Pombe]
Description(s) found:
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  • pir||T38131 hypothetical protein SPAC20G8.09c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|3219939|sp|P87115.1|YDK9_SCHPO RecName: Full=UPF0202 protein C20G8.09c [NCBI NR]
  • gi|2094864|emb|CAB08603.1| N-acetyltransferase Nat10 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114238|ref|NP_593326.1| N-acetyltransferase Nat10 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • N-acetyltransferase Nat10 [Sanger Pombe]
  • UPF0202 protein C20G8.09c OS=Schizosaccharomyces pombe GN=SPAC20G8.09c PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YNL132W/KRE33 KILLER TOXIN RESISTANT NULL LETHAL- AND INDUCED BY GLUCOSE REPRESSION; HIGHLY CONSERVED: P87115; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YNL132W/KRE33 KILLER TOXIN RESISTANT WHICH IS NULL LETHAL- AND INDUCED BY GLUCOSE REPRESSION; HIGHLY CONSERVED: P87115; [pompepV13]
  • Hypothetical UPF0202 protein C20G8.09c in chromosome I [pompep4896]
  • |||conserved protein [pompepnew.fasta]
  • |||conserved protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein; similar to S. cerevisiae YNL132W/KRE33 Killer toxin resistant which is null lethal-and induced by glucose repression; highly conserved [Schizosaccharomyces pombe]gi|2094864|emb|CAB08603.1| SPAC20G8.09c [Schizosaccharomyces pombe]gi [nrdb_11152004_Chlamydomonas]
  • (P87115) Hypothetical UPF0202 protein C20G8.09c in chromosome I [pompep4896_normal_reversed]
  • |nat10||N-acetyltransferase Nat10 |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • UPF0202 protein C20G8.09c [nr-271106-contam.fasta]
  • hypothetical protein SPAC20G8.09c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC20G8.09c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||N-acetyltransferase Nat10 |Schizosaccharomyces pombe|chr 1|||Manual [spombe-190209-contam.fasta]
  • |||ribosome biogenesis ATPase |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 1033 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: ribosome biogenesis [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    acetyltransferase activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKALDSRI PTLIKNGCQE KQRSFFVVVG DRARDQVVNL HWLLSQSKVA ARPNVLWMYK  60
   61 KDLLGFTSHR KKRENKIKKE IKRGIRDPNS EDPFELFCSI TNIRYCYYKE SEKILGQTYG 120
  121 MLVLQDFEAL TPNLLARTIE TVEGGGIVVL LLHKLNSLKQ LYTMSMDIHS RYRTEAHSDV 180
  181 TARFNERFIL SLGNCENCLV IDDELNVLPI SGGKNVKALP PTLEEDNSTQ NSIKELQESL 240
  241 GEDHPAGALV GVTKTLDQAR AVLTFVESIV EKSLKGTVSL TAGRGRGKSA ALGLAIAAAI 300
  301 AHGYSNIFIT SPSPENLKTL FEFIFKGFDA LNYEEHVDYD IIQSTNPAYH NAIVRVNIFR 360
  361 DHRQTIQYIS PEDSNVLGQA ELVVIDEAAA IPLPLVRKLI GPYLVFMAST INGYEGTGRS 420
  421 LSLKLLQQLR EQSRIYSGSG NNKSDSQSHI SGRTLKEISL DEPIRYAMGD RIELWLNKLL 480
  481 CLDAASYVSR MATQGFPHPS ECSLYRVSRD TLFSYHPISE AFLQRMMSLY VASHYKNSPN 540
  541 DLQLMSDAPA HQLFVLLPPV DLKNPKLPDP ICVIQLALEG SISRESIMNS LSRGQRAGGD 600
  601 LIPWLISQQF QDENFAALGG ARIVRIAVSP EHVKMGYGTR AMQLLHEYFE GKFISASEEF 660
  661 KAVKHSLKRI GDEEIENTAL QTEKIHVRDA KTMPPLLLKL SELQPEPLHY VGVSYGLTPS 720
  721 LQKFWKREGY CPLYLRQTAN DLTGEHTCVM LRVLEGRDSE WLGAFAQNFY RRFLSLLGYQ 780
  781 FREFAAITAL SVLDACNNGT KYVVNSTSKL TNEEINNVFE SYDLKRLESY SNNLLDYHVI 840
  841 VDLLPKLAHL YFSGKFPDSV KLSPVQQSVL LALGLQYKTI DTLEKEFNLP SNQLLAMLVK 900
  901 LSKKIMKCID EIETKDIEEE LGSNKKTESS NSKLPEFTPL QQSLEEELQE GADEAMLALR 960
  961 EKQRELINAI DLEKYAIRGN EEDWKAAENQ IQKTNGKGAR VVSIKGEKRK NNSLDASDKK1020
 1021 TKEKPSSKKK FRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..92] deduced N/A No confident structure predictions are available.
    2 View Details [93..222] Pfam 60.200659 No description for PF08351.2 was found. No confident structure predictions are available.
    3 View Details [223..754] FFAS03 1.1 DEXX box DNA helicase
    4 View Details [755..1033] PSI-BLAST 12.39794 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • structural constituent of ribosome
    		•  2.58352785213483 bayes_pls_golite062009
  • binding
    		•  2.3830857772509 bayes_pls_golite062009
  • structural molecule activity
    		•  1.70306030734033 bayes_pls_golite062009
  • RNA helicase activity
    		•  1.40594009629203 bayes_pls_golite062009
  • ATP-dependent RNA helicase activity
    		•  1.38650114394757 bayes_pls_golite062009
  • RNA-dependent ATPase activity
    		•  1.372924601535 bayes_pls_golite062009
  • helicase activity
    		•  1.17712281740941 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  1.12969667337016 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  1.12969667337016 bayes_pls_golite062009
  • RNA binding
    		•  0.90930722867621 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.61841039337932 bayes_pls_golite062009
    		• 0.506052368661833 bayes_pls_golite062009
  • DNA binding
    		•  0.327221599656875 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.179080000736404 bayes_pls_golite062009
  • protein binding
    		•  0.102043618157662 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.0283323446458181 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle