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Protein Overview: SPAC1F8.04c

General Information:
Name(s) found: SPAC1F8.04c [Sanger Pombe]
Description(s) found:
Found 16 descriptions.
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  • hydrolase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 463 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to stress [IEPLink to PubMed article]
    Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [IEA]
    zinc ion binding [IEA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYTHANIIT VNPTRDILID GAILVKDGSN TIDDIGKTDR LVSIYPNEKH KSLEGHIVMP  60
   61 GLISLHVHLA QSLLRSAADD LPLISWLCDT VWKMQGNFTQ EDGYVASQLT IAEMLKSGTT 120
  121 TFVEALFAQR YGIEGAVKAV IESGIRGCIG KVVMDQPRYA TQTGVSMHEG LIENSNSLNQ 180
  181 AVESHSKFHG KGNGRVEIWF GARTPGGVSE ELYRKMVKIA RANNIGITMH CAEVKADREF 240
  241 FASKEHTPMT YCKDLGLLGP KTVLAHMVHL DTQDLEILEK HGNGTSVAHC PVSNSKLGSG 300
  301 IAPLKEMLEK SIIVGIGCDG CPCNNTMDLL QEMKMASLLP KALHGDPSIV PAEKIVEMAT 360
  361 INGAKALGRD DLGSLEVGKK ADFISLDLSN KLYAQPLRDL VSAVVYIATG ADVATVVIDG 420
  421 KLIVEDHVLL TIDEPKLIDK AKKHGKKLQE RAKVDVKGRW KEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..463] PSI-BLAST 52.0 Hypothetical protein TM0936; Hypothetical protein TM0936, probable catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • guanine deaminase activity
    		•  3.78802420851729 bayes_pls_golite062009
  • hydrolase activity
    		•  3.06979421893431 bayes_pls_golite062009
  • adenine deaminase activity
    		•  1.87830487335945 bayes_pls_golite062009
  • deaminase activity
    		•  1.79186203771221 bayes_pls_golite062009
  • catalytic activity
    		•  1.70199291046899 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.60895003474033 bayes_pls_golite062009
  • dihydropyrimidinase activity
    		•  1.51712244686012 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
    		•  0.787370269329878 bayes_pls_golite062009
  • binding
    		•  0.771164376899668 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.629962267754185 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.573107361273483 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.506159010274668 bayes_pls_golite062009
  • DNA binding
    		•  0.462348875991261 bayes_pls_golite062009
  • peptidase activity
    		•  0.370872229900721 bayes_pls_golite062009
  • dihydroorotase activity
    		•  0.203044795244555 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle