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Protein Overview: gi|19112091, gi|...

General Information:
Name(s) found: gi|8247662 [NCBI NR]
gi|3915404 [NCBI NR]
gi|19112091 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|8247662|emb|CAA17932.3| SPBC119.17 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|3915404|sp|O42908.1|CYM1_SCHPO RecName: Full=Mitochondrial presequence protease [NCBI NR]
  • ref|NP_595299.1| putative zinc metalloprotease [Schizosaccharomyces pombe] [NCBI NR]
    • Organism: Schizosaccharomyces pombe
    Length: 882 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial intermembrane space [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: proteolysis [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    metalloendopeptidase activity [IEA]
    metallopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYAKLSIAF SKKTIKTHNC RLFQRWLHVG DKVHDFRVVD TKKVPELQLN YTRLKHEPTN  60
   61 ADMIHLDRED PNSVFSIGFQ TPAENDEGIP HILEHTTLCG SNKYPVRDPF FKMLNRSLAT 120
  121 FMNAFTASDF TFYPFATVNT TDYKNLRDVY LDATLFPKLR KLDFLQEGWR FEHADVNDKK 180
  181 SPIIFNGVVY NEMKGQVSDS SYIFYMLFQQ HLFQGTAYGF NSGGDPLAIP DLKYEELVKF 240
  241 HRSHYHPSNA KILSYGSFPL EDNLSALSET FRPFSKRELN LPNTFLKEFD QEKRVVEYGP 300
  301 LDPVMAPGRQ VKTSISFLAN DTSNVYETFA LKVLSKLCFD GFSSPFYKAL IESGLGTDFA 360
  361 PNSGYDSTTK RGIFSVGLEG ASEESLAKIE NLVYSIFNDL ALKGFENEKL EAILHQMEIS 420
  421 LKHKSAHFGI GLAQSLPFNW FNGADPADWL SFNKQIEWLK QKNSDGKLFQ KLIKKYILEN 480
  481 KSRFVFTMLP SSTFPQRLQE AEAKKLQERT SKLTDEDIAE IEKTSVKLLE AQSTPADTSC 540
  541 LPTLSVSDIP ETIDETKLKF LDIAGMKAQW YDLAAGLTYI RLLLPLKNFP ESLIPYLPVY 600
  601 CDACLNLGTH SESIGDLEHQ IRRYTGGISI SPSAVTNNSD VSKYELGIAI SGYALDKNVG 660
  661 KLVELINKAF WNTNLSNTDK LAIMLKTSVS GITDGIAEKG HSFAKVSSAS GLTEKTSITE 720
  721 QLGGLTQVKL LSQLSREESF GPLVEKLTAI REILRGTSGF KAAINASPTQ HEVVEKALQK 780
  781 FMKSRGVNQQ TQTKSTSKER NGINSIKTYH ELPFQTYFAA KSCLGVPYTH PDGAPLQILS 840
  841 SLLTHKYLHG EIREKGGAYG AGLSYSGIDG VLSFFTYRDS DP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..882] PSI-BLAST 137.0 No description for 2fgeA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • metalloendopeptidase activity
    		•  3.72038852665442 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.60100837479757 bayes_pls_golite062009
  • peptidase activity
    		•  3.59435865021473 bayes_pls_golite062009
  • metallopeptidase activity
    		•  3.51928093329287 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.00607833553933 bayes_pls_golite062009
  • hydrolase activity
    		•  2.42559068821325 bayes_pls_golite062009
  • catalytic activity
    		•  1.30647052031202 bayes_pls_golite062009
  • binding
    		•  0.820758410659358 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle