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Protein Overview: SPBC25H2.03

General Information:
Name(s) found: SPBC25H2.03 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • vacuolar protein involved in phosphoinositide metabolism [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 811 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    fungal-type vacuole membrane [ISSLink to PubMed article]
    protein complex [RCALink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: vacuole inheritance [ISSLink to PubMed article]
    phosphoinositide-mediated signaling [NASLink to PubMed article]
    phosphoinositide metabolic process [NASLink to PubMed article]
    phospholipid metabolic process [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNLLVRGLT HKLYDKRKAT AYELERVVKG YLENDETEKI RAVISQLAND FVYSPARGPN  60
   61 ATFGGLIGLA AVAIALGPKI DSYMESILLP VLYCFNDSDS KIRYYACESM YNIGKVAKGE 120
  121 VFRYFNLIFD VLCKLFADTE ITVKNGAELL DRLIKDIVMQ QAATYMSSAE DIKNFKEGPV 180
  181 SSSIQDVPVM STEQPRMHTF SLSELVPLLS ERLYVINPNT RMFLVSWIRL LDSIPDLEFI 240
  241 SYLPFLLDGL MNYLSDPNES IRIVTSNCLY DFLREIQKIA KVKYHILQRD EESEPDFFDS 300
  301 MVRRNMSDAE LKEISDYVES SLRDGSFILE AHIQIDYKRI LEIIIDHLGS SVPLIQEKAL 360
  361 KWLFEFIYIA PKDVLLQIPK VLENLLPLMS NDENMRQSAK DLSQNLVILV SKIMDIEFSG 420
  421 SETNNKDNSL SVDFRSLIEV LQKLLSNDNE ETRLCALEWV LLLQRRTGGK LINMHDPIFQ 480
  481 TLLLQLSDPS DLVVSRTLEL LAHIAISHKS VNLVPFLKSL LQMFAEDRKF LNSRGNLIIR 540
  541 QLCNYIEGER VYTSFAGILE TEENLELASI MVEVLNNNLF TAPELYDLRK KLKQSAPKLQ 600
  601 NIFTTLYTAW CHNSIAVFSL CLLSQNYEHA ANLLSVFAEI EFNIDMLIQL DKLVQLIESP 660
  661 VFTYMRLQLL EPEKYPYLHK ALYGILMLLP QSSAFRTLRD RLQCSSTPRT NTILANERLP 720
  721 RSRRDDPYWT DLLERLKAVQ LSHQNNYREP IRATRLALAG ALPSTPTATT ISTTTSASGI 780
  781 TTTASNSRDS FITRLPPTAA LSTGARKKPK Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..579] PSI-BLAST 73.39794 No description for 2h4mA was found.
    2 View Details [580..672] PSI-BLAST 34.221849 Crystal Structure of The Cand1-Cul1-Roc1 Complex
    3 View Details [673..811] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle