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Protein Overview: mcp7

General Information:
Name(s) found: mcp7 / SPAC13A11.03 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • meiosis specific coiled-coil protein Mcp7 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 210 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: reciprocal meiotic recombination [IGILink to PubMed article][IMPLink to PubMed article]
    synapsis [IMPLink to PubMed article]
    double-strand break repair [ISSLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKGLSLAE KRRRLEAIFH DSKDFFQLKE VEKLGSKKQI VLQTVKDVLQ SLVDDNIVKT  60
   61 EKIGTSNYYW SFPSDAKRSR ESVLGSLQAQ LDDLKQKSKT LDENISFEKS KRDNEGTEND 120
  121 ANQYTLELLH AKESELKLLK TQLSNLNHCN PETFELKNEN TKKYMEAANL WTDQIHTLIA 180
  181 FCRDMGADTN QIREYCSIPE DLDDLQLPIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] FFAS03 1.47 No description for 2g9wA was found.
    2 View Details [75..210] PSI-BLAST 4.0 No description for 2i1jA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  3.43291559958598 bayes_pls_golite062009
  • DNA binding
    		•  3.3647397700181 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.2907348579166 bayes_pls_golite062009
  • binding
    		•  3.2287204659268 bayes_pls_golite062009
  • transcription factor activity
    		•  2.56149193357611 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.29833348412438 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.28654223481433 bayes_pls_golite062009
  • transcription activator activity
    		•  1.12578574440827 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.975119185383629 bayes_pls_golite062009
  • protein binding
    		•  0.933833716716586 bayes_pls_golite062009
  • DNA-dependent ATPase activity
    		•  0.685909148192434 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.516581502758384 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.300710367763552 bayes_pls_golite062009
  • DNA helicase activity
    		•  0.295322409391238 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle