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View Structure Prediction Details

Protein: mcp7
Organism: Schizosaccharomyces pombe
Length: 210 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mcp7.

Description E-value Query
Range		 Subject
Range
gi|50746128 - gi|50746128|ref|XP_420365.1| PREDICTED: similar to tripartite motif-containing 2; tripartite motif p...
 265.0 [0..2] [206..899]
gi|109466950, gi... - gi|109466950|ref|XP_001072054.1| PREDICTED: similar to GAJ protein [Rattus norvegicus], gi|109464988...
 256.0 [0..2] [206..100]
gi|123982216, gi... - gi|123997001|gb|ABM86102.1| meiotic nuclear divisions 1 homolog (S. cerevisiae) [synthetic construct...
gi|114596457 - gi|114596457|ref|XP_517488.2| PREDICTED: GAJ protein [Pan troglodytes]
MND1 - meiotic nuclear divisions 1 homolog (S. cerevisiae)
 217.0 [0..2] [206..3]
gi|109075993 - gi|109075993|ref|XP_001087396.1| PREDICTED: similar to GAJ protein [Macaca mulatta]
 216.0 [0..2] [206..3]
MND1_MOUSE - Meiotic nuclear division protein 1 homolog OS=Mus musculus GN=Mnd1 PE=1 SV=1
 215.0 [0..2] [206..3]
MND1_BOVIN - Meiotic nuclear division protein 1 homolog OS=Bos taurus GN=MND1 PE=2 SV=1
 214.0 [0..2] [206..3]
gi|73978315 - gi|73978315|ref|XP_539771.2| PREDICTED: similar to GAJ protein [Canis familiaris]
 213.0 [0..2] [206..3]
MND1_ARATH - Meiotic nuclear division protein 1 homolog OS=Arabidopsis thaliana GN=MND1 PE=1 SV=1
 209.0 [0..2] [207..3]
gi|68354610 - gi|68354610|ref|XP_693671.1| PREDICTED: hypothetical protein [Danio rerio]
 204.0 [0..2] [205..3]

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Predicted Domain #1
Region A:
Residues: [1-74] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPKGLSLAE KRRRLEAIFH DSKDFFQLKE VEKLGSKKQI VLQTVKDVLQ SLVDDNIVKT  60
   61 EKIGTSNYYW SFPS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.47
Match: 2g9wA
Description: No description for 2g9wA was found.

Predicted functions:

Term Confidence Notes
transcription regulator activity 3.43291559958598 bayes_pls_golite062009
DNA binding 3.3647397700181 bayes_pls_golite062009
nucleic acid binding 3.2907348579166 bayes_pls_golite062009
binding 3.2287204659268 bayes_pls_golite062009
transcription factor activity 2.56149193357611 bayes_pls_golite062009
sequence-specific DNA binding 1.29833348412438 bayes_pls_golite062009
structure-specific DNA binding 1.28654223481433 bayes_pls_golite062009
transcription activator activity 1.12578574440827 bayes_pls_golite062009
transcription repressor activity 0.975119185383629 bayes_pls_golite062009
protein binding 0.933833716716586 bayes_pls_golite062009
DNA-dependent ATPase activity 0.685909148192434 bayes_pls_golite062009
RNA polymerase II transcription factor activity 0.516581502758384 bayes_pls_golite062009
double-stranded DNA binding 0.300710367763552 bayes_pls_golite062009
DNA helicase activity 0.295322409391238 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [75-210] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAKRSRESVL GSLQAQLDDL KQKSKTLDEN ISFEKSKRDN EGTENDANQY TLELLHAKES  60
   61 ELKLLKTQLS NLNHCNPETF ELKNENTKKY MEAANLWTDQ IHTLIAFCRD MGADTNQIRE 120
  121 YCSIPEDLDD LQLPIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2i1jA
Description: No description for 2i1jA was found.
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