General Information: |
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Name(s) found: |
SPAP8A3.06
[Sanger Pombe]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Schizosaccharomyces pombe |
Length: | 216 amino acids |
Gene Ontology: |
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Cellular Component: |
commitment complex
[IDA]
nucleus [IDA] cytosol [IDA] U2 snRNP [TAS] |
Biological Process: |
generation of catalytic spliceosome for first transesterification step
[IDA]
nuclear mRNA splicing, via spliceosome [IDA] |
Molecular Function: |
zinc ion binding
[IEA]
RNA binding [ISS] |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MASHLASIYG TEQDKVNCSF YYKIGACRHG ERCSRKHVKP NFSQTILCPN MYKNPIHEPN 60 61 GKKFTQRELA EQFDAFYEDM FCEFSKYGEV EQLVVCDNVG DHLVGNVYVR FKYEESAQNA 120 121 IDDLNSRWYS QRPVYAELSP VTDFREACCR QHETSECQRG GLCNFMHAKK PSPQLLRDLV 180 181 LAQRKYLALN AAEEMKKEPN SDSTNRWVSV TAERKN |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..151] | 9.69897 | U2AF35 (35 KDa subunit) | |
2 | View Details | [152..216] | 2.908996 | View MSA. No confident structure predictions are available. |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)