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Protein Overview: SPBC342.02

General Information:
Name(s) found: SPBC342.02 [Sanger Pombe]
Description(s) found:
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  • pir||T40275 probable glutaminyl-trna synthetase - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|5441789|emb|CAB46772.1| cytoplasmic glutaminyl-tRNA ligase Qrs1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113537|ref|NP_596745.1| glutaminyl-tRNA synthetase (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|11387159|sp|Q9Y7Y8.1|SYQ_SCHPO RecName: Full=Probable glutaminyl-tRNA synthetase; AltName: Full=Glutamine--tRNA ligase; Short=GlnRS [NCBI NR]
  • glutaminyl-tRNA synthetase [Sanger Pombe]
  • Probable glutaminyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=SPBC342.02 PE=2 SV=1 [Swiss-Prot]
  • GLUTAMINYL-TRNA SYNTHETASE, MITOCHONDRIAL; SIMILAR TO S. CEREVISIAE GLN4: Q9Y7Y8; [pompepVF.fasta]
  • GLUTAMINYL-TRNA SYNTHETASE, MITOCHONDRIAL: Q9Y7Y8; [pompepV13]
  • Probable glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) [pompep4896]
  • |||glutaminyl-tRNA synthetase [pompepnew.fasta]
  • |||glutaminyl-tRNA synthetase (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • probable glutaminyl-trna synthetase [Schizosaccharomyces pombe]gi|5441789|emb|CAB46772.1| SPBC342.02 [Schizosaccharomyces pombe]gi|7492598|pir||T40275 probable glutaminyl-trna synthetase - fission yeast (Schizosaccharomyces pombe)gi|11387159|sp|Q9Y7Y8 [nrdb_11152004_Chlamydomonas]
  • |||glutaminyl-tRNA synthetase |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9Y7Y8) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA ligase) (GlnRS) [pompep4896_normal_reversed]
  • |qrs1||cytoplasmic glutaminyl-tRNA ligase Qrs1 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC342.02 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC342.02 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Probable glutaminyl-tRNA synthetase (Glutamine--tRNA ligase) (GlnRS) [nr-271106-contam.fasta]
  • Probable glutamine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=qrs1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 811 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: glutaminyl-tRNA aminoacylation [ICLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    glutamine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQDYEELRA KFTKIGLNET TVKDTLKNKK LSSSLNKVIE ETNVGSSGCD RTIGNLLFTL  60
   61 ANASLKQKDP KSNAHEAFIA SKIVSGDLKT NLQVNAAITY CKDKDTIDES EFDKETGVGV 120
  121 VLTPEQIEQL VGDYVAENKS KILEQRYQLL NPSASALRQH ALLKWAPQLE VKQTLDRKFL 180
  181 ELLGPKTEQD AAAGKKKGAK AKNSKQKTVD SGKAKEQKIV SEQSKKYNMF EEGFLAKLHK 240
  241 PGGNTQLIPE RMKEHLQATG GGVVTRFPPE PNGYLHIGHS KAIAVNFGFA RYHNGVCYLR 300
  301 FDDTNPEAEE ERYFESIKDL VAWLGFQPYK ITYSSDYFDK LYELAEELIK RDKAYVCHCT 360
  361 DAEIKKARGG EERGPRYACV HRDRPIEESL LEFRNMRDGK YQPKEAILRM KQDLSDGNPQ 420
  421 MWDLIAYRVL NSPHPRTGDK WKIYPTYDFT HCLVDSFENI SHSLCTTEFI LSRVSYEWLC 480
  481 NALEVYCPAQ REYGRLNVVG TLMSKRKIMK LVKEGYVHGW NDPRLYTLVA LRRRGVPPGA 540
  541 ILEFVSEVGV TTAVSNIEVA RFENCVRKFL ENSVPRLMFL PDPIKVTLEN LDDSYREQIE 600
  601 IPFNPKDPSM GSRSAFLTKH IYIDRSDFRE EASSDFFRLT LGQPVGLFRA SHPVVAKRVV 660
  661 KNDEGEPIEI IAEYDASSSK KPKTFIQWVS RDKESNSPVL IAETRLFNNL FKCDNPAALK 720
  721 EQELAAQLNP ESEVVLKNSI IEPGIYDLIK SAPWPKTDSS AGVDKAENPE SVRFQAMRVG 780
  781 YFCLDEDTKK PNHLVLNRIV SLREDSAKNK N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..166] Pfam 101.769551 No description for PF04558.6 was found. No confident structure predictions are available.
    2 View Details [167..240] PSI-BLAST 17.0 Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
    3 View Details [241..811] PSI-BLAST 154.0 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain; Glutaminyl-tRNA synthetase (GlnRS)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • glutamine-tRNA ligase activity
    		•  7.66556935228325 bayes_pls_golite062009
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.16276509815667 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  7.16276509815667 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.13957775963187 bayes_pls_golite062009
  • ligase activity
    		•  6.11211476973434 bayes_pls_golite062009
  • lysine-tRNA ligase activity
    		•  4.64665624411373 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  4.61484562096458 bayes_pls_golite062009
  • structural molecule activity
    		•  4.261982318682 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
    		•  2.63681738794687 bayes_pls_golite062009
  • catalytic activity
    		•  2.37674226834122 bayes_pls_golite062009
  • 5S rRNA binding
    		•  2.25646775578129 bayes_pls_golite062009
  • rRNA binding
    		•  2.12571610259264 bayes_pls_golite062009
  • methionine-tRNA ligase activity
    		•  2.01261843164558 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
    		•  1.88984817882585 bayes_pls_golite062009
  • tryptophan-tRNA ligase activity
    		•  1.14187887833901 bayes_pls_golite062009
  • arginine-tRNA ligase activity
    		•  1.13743634264647 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.06535308346284 bayes_pls_golite062009
  • cysteine-tRNA ligase activity
    		•  0.844943947059557 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.625793556381714 bayes_pls_golite062009
  • binding
    		•  0.47302762432927 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.161799496958314 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle