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Protein Overview: pmt3

General Information:
Name(s) found: pmt3 / SPBC365.06 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • SUMO [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 117 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    spindle pole body [IDALink to PubMed articleLink to PubMed article]
    Biological Process: chromatin silencing at centromere [IMPLink to PubMed article]
    negative regulation of histone H3-K4 methylation [IMPLink to PubMed article]
    negative regulation of histone H3-K9 methylation [IMPLink to PubMed article]
    protein sumoylation [TASLink to PubMed article]
    chromosome segregation [IMPLink to PubMed article]
    telomere maintenance [IMPLink to PubMed article]
    chromatin silencing at silent mating-type cassette [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    protein tag [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESPSANIS DADKSAITPT TGDTSQQDVK PSTEHINLKV VGQDNNEVFF KIKKTTEFSK  60
   61 LMKIYCARQG KSMNSLRFLV DGERIRPDQT PAELDMEDGD QIEAVLEQLG GCTHLCL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] PSI-BLAST 20.0 Solution Structure of Human SUMO-2 (SMT3B), a Ubiquitin-like Protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • SUMO ligase activity
    		•  3.84399877513864 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  3.71144418714309 bayes_pls_golite062009
  • ubiquitin-protein ligase activity
    		•  2.89535476350045 bayes_pls_golite062009
  • binding
    		•  2.786655943372 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  2.72499875710239 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.21955949922709 bayes_pls_golite062009
  • tubulin binding
    		•  2.21127283188349 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.20811136250556 bayes_pls_golite062009
  • protein tag
    		•  2.15059229834935 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.9984951714209 bayes_pls_golite062009
  • microtubule binding
    		•  1.92602521631666 bayes_pls_golite062009
  • protein binding
    		•  1.86841453215444 bayes_pls_golite062009
  • DNA binding
    		•  1.86539227646379 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  1.34783881509181 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.753885975469065 bayes_pls_golite062009
  • signal transducer activity
    		•  0.65988002090613 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.65988002090613 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.62324312069889 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.599634454232833 bayes_pls_golite062009
  • structural molecule activity
    		•  0.576819726104993 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.570143717979967 bayes_pls_golite062009
  • protein kinase activity
    		•  0.325253662829604 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.249928925871521 bayes_pls_golite062009
  • enzyme binding
    		•  0.240262781026149 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.0871262449740772 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0816453389356582 bayes_pls_golite062009
  • kinase activity
    		•  0.0363894273406812 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle