| Protein: | pmt3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 117 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pmt3.
| Description | E-value | Query Range |
Subject Range |
|
|
141.0 | [0..10] | [116..169] |
|
|
137.0 | [0..36] | [116..1464] |
|
|
137.0 | [0..36] | [116..1946] |
|
|
136.0 | [0..28] | [117..86] |
|
|
136.0 | [0..36] | [116..423] |
|
Region A: Residues: [1-117] |
1 11 21 31 41 51
| | | | | |
1 MSESPSANIS DADKSAITPT TGDTSQQDVK PSTEHINLKV VGQDNNEVFF KIKKTTEFSK 60
61 LMKIYCARQG KSMNSLRFLV DGERIRPDQT PAELDMEDGD QIEAVLEQLG GCTHLCL
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1wz0A |
| Description: | Solution Structure of Human SUMO-2 (SMT3B), a Ubiquitin-like Protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SUMO ligase activity | 3.84399877513864 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 3.71144418714309 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 2.89535476350045 | bayes_pls_golite062009 |
| binding | 2.786655943372 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 2.72499875710239 | bayes_pls_golite062009 |
| transcription regulator activity | 2.21955949922709 | bayes_pls_golite062009 |
| tubulin binding | 2.21127283188349 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.20811136250556 | bayes_pls_golite062009 |
| protein tag | 2.15059229834935 | bayes_pls_golite062009 |
| nucleic acid binding | 1.9984951714209 | bayes_pls_golite062009 |
| microtubule binding | 1.92602521631666 | bayes_pls_golite062009 |
| protein binding | 1.86841453215444 | bayes_pls_golite062009 |
| DNA binding | 1.86539227646379 | bayes_pls_golite062009 |
| general RNA polymerase II transcription factor activity | 1.34783881509181 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 0.753885975469065 | bayes_pls_golite062009 |
| signal transducer activity | 0.65988002090613 | bayes_pls_golite062009 |
| molecular transducer activity | 0.65988002090613 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 0.62324312069889 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.599634454232833 | bayes_pls_golite062009 |
| structural molecule activity | 0.576819726104993 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.570143717979967 | bayes_pls_golite062009 |
| protein kinase activity | 0.325253662829604 | bayes_pls_golite062009 |
| single-stranded DNA binding | 0.249928925871521 | bayes_pls_golite062009 |
| enzyme binding | 0.240262781026149 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0871262449740772 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0816453389356582 | bayes_pls_golite062009 |
| kinase activity | 0.0363894273406812 | bayes_pls_golite062009 |
