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Protein Overview: cwf12

General Information:
Name(s) found: cwf12 / SPBC32F12.05c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • complexed with Cdc5 protein Cwf12 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 217 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spliceosomal complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: RNA splicing, via transesterification reactions [ISSLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSAKYVVGS KPTEKRPKDI KSIKSVPICE KHRASVVKDI SRKISRIQSA TLPEYQIRDL  60
   61 NDAINRLMRE KHEWEVQIRD LGGINYLYNK AKLFEDEGEQ ISDIDDYRYY GRARELPGVK 120
  121 ELFEADMSFI PERQRKQEMQ KRRLDAWYFG YIPPAQESLL EDFEAKIEEQ QHKHLENLGD 180
  181 EVEQDWKPLV IEQIPTRDDV EAILLERRKN ALLSRIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 32.045757 Solution structure of Isy1 domain in hypothetical protein
    2 View Details [125..217] MSA 2.033992 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
    		• 8.16477902643941 bayes_pls_golite062009
  • catalytic activity
    		•  0.368034275052766 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle