Protein Overview: FBpp0309477, Ubqn-PA

General Information:
Name(s) found:	FBpp0309477 [FlyBase] Ubqn-PA / FBpp0074519 [FlyBase]
Description(s) found: Found 27 descriptions. SHOW ALL	type=protein; loc=X:join(19578034..19578129,19578473..19579943,19580023..19580099); ID=FBpp0309477; name=Ubqn-PB; parent=FBgn0031057,FBtr0340612; dbxref=FlyBase:FBpp0309477,FlyBase_Annotation_IDs:CG14224-PB; MD5=3897ea93189b34cb09c0452404194680; length=547; release=r5.56; species=Dmel; [FlyBase] The gene Ubiquilin is referred to in FlyBase by the symbol Dmel\Ubqn (CG14224, FBgn0031057). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19577781..19581273. It has the cytological map location 18E1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: amyloid precursor protein metabolic process. 8 alleles are reported. The phenotypes of these alleles are annotated with 12 unique terms, many of which group under: adult segment; adult mesothoracic segment; organ system; thoracic segment; external compound sense organ; nervous system; peripheral nervous system; multi-cell-component structure; compound cell cluster organ; wing cell. It has one annotated transcript and one annotated polypeptide. [FlyBase]
Organism:	Drosophila melanogaster
Length:	547 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	amyloid precursor protein metabolic process [IMP]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEGGSKRIN VVVKTPKDKK TVEVDEDSGI KDFKILVAQK FEAEPEQLVL IFAGKIMKDT  60
   61 DTLQMHNIKD NLTVHLVIKA PTRNNEQPAR QPADVRQTPF GLNQFGGLAG MEALGAGSNT 120
  121 FMDLQARMQN ELLNNGDMLR SLMDNPMVQQ MMNNPDTMRQ LITSNPQMHD LMQRNPEISH 180
  181 MLNNPDLLRQ TMELARNPSM LQELMRSHDR AMSNLESVPG GYSALQRIYR DIQEPMMNAA 240
  241 TESFGRNPFA GLVDGGGSGA GNNPQQGTEN RNPLPNPWGG ANSGTNGTVG GSGAGNPTGD 300
  301 LPPNNVLNTP AMRSLLQQMA DNPAMMQNLL NAPYTRSMME SMSQDPDMAA RLLSSSPLMS 360
  361 NNPALQEQVR QMMPQFMAQM QNPEVMNMLT NPDAMNAILQ IQQGMEQLRS AAPGLVGTLG 420
  421 IPPPPPGAGT GTNPASGDGS GGNSGASTNN VSPSSGLNAG TGTPNLAPGG GPNAQLFNDF 480
  481 MMRMLNGMSN NADNTQPPEV RYQSQLEQLN AMGFVNRDAN LQALIATFGD INAAVERLLS 540
  541 LNQLSLS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
small conjugating protein ligase activity	3.1015291294575	bayes_pls_golite062009
ubiquitin-protein ligase activity	2.66488876049395	bayes_pls_golite062009
binding	2.35732272412639	bayes_pls_golite062009
acid-amino acid ligase activity	2.21945212115988	bayes_pls_golite062009
protein tag	2.15059229834935	bayes_pls_golite062009
protein binding	1.86841453215444	bayes_pls_golite062009
transcription regulator activity	0.82919698244809	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.753885975469065	bayes_pls_golite062009
nucleic acid binding	0.744068636783535	bayes_pls_golite062009
DNA binding	0.635408380268467	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.536856055841234	bayes_pls_golite062009
kinase activity	0.506057697290914	bayes_pls_golite062009
SUMO ligase activity	0.412533160717297	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	0.410719674374641	bayes_pls_golite062009
transferase activity	0.236208643697075	bayes_pls_golite062009
protein kinase activity	0.038557482883633	bayes_pls_golite062009

No functions predicted.

Term	Confidence	Notes
binding	1.97462588597633	bayes_pls_golite062009
small conjugating protein binding	1.17371403847093	bayes_pls_golite062009
protein binding	1.07513578953037	bayes_pls_golite062009
transcription regulator activity	0.975058929011586	bayes_pls_golite062009
nucleic acid binding	0.964788761596736	bayes_pls_golite062009
ubiquitin binding	0.83381750627184	bayes_pls_golite062009
DNA binding	0.778785306874919	bayes_pls_golite062009
catalytic activity	0.25774924710417	bayes_pls_golite062009
small conjugating protein-specific protease activity	0.172026786640155	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.97

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..97]	PSI-BLAST	17.0	Solution Structure of the N-terminal Ubiquitin-like Domain in the Human Ubiquilin 3 (UBQLN3)
2	View Details	[98..287]	FFAS03	0.973	Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
3	View Details	[288..472]	PSI-BLAST	6.522879	Sec24
4	View Details	[473..547]	PSI-BLAST	8.522879	Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA

Protein Overview: FBpp0309477, Ubqn-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: