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Protein Overview: FBpp0311888, mRp...

General Information:
Name(s) found: FBpp0311888 [FlyBase]
mRpS14-PA / FBpp0074554 [FlyBase]
Description(s) found:
Found 26 descriptions.
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  • type=protein; loc=X:complement(19373463..19373786,19373847..19373909); ID=FBpp0311888; name=mRpS14-PB; parent=FBgn0044030,FBtr0346015; dbxref=FlyBase:FBpp0311888,FlyBase_Annotation_IDs:CG32531-PB; MD5=65906de82744c505ddb9f5049fb31eac; length=128; release=r5.56; species=Dmel; [FlyBase]
  • The gene mitochondrial ribosomal protein S14 is referred to in FlyBase by the symbol Dmel\mRpS14 (CG32531, FBgn0044030). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19373463..19373909. It has the cytological map location 18C7. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 128 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial ribosome [ISS]
    mitochondrial small ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLARIGGF VCQSVQIAGC GLQQVRTKYA DWKMIRDVKR RKCVKENAVE RLRVNSLRKN  60
   61 DILPPELREV ADAEIAAFPR DSSLVRVRER CALTSRPRGV VHKYRLSRIV WRHLADYNKL 120
  121 SGVQRAMW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..128] PSI-BLAST 32.0 No description for 1vs5N was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  6.46626105355287 bayes_pls_golite062009
  • structural molecule activity
    		•  5.9950507001335 bayes_pls_golite062009
  • binding
    		•  2.38688645545392 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.06638295156835 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.86905163192306 bayes_pls_golite062009
  • DNA binding
    		•  1.86136246408845 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
    		•  1.85717131429984 bayes_pls_golite062009
  • protein binding
    		•  1.60194768638501 bayes_pls_golite062009
  • transcription factor activity
    		•  1.28200214216555 bayes_pls_golite062009
  • transcription factor binding
    		•  1.02376991656046 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.48169971060149 bayes_pls_golite062009
  • transcription activator activity
    		•  0.42927665410421 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.33193976709857 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.29526103320546 bayes_pls_golite062009
  • ligand-dependent nuclear receptor activity
    		•  0.27479486808555 bayes_pls_golite062009
  • catalytic activity
    		•  0.101795606736461 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle