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Protein Overview: CG9609-PA

General Information:
Name(s) found: CG9609-PA / FBpp0074130 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG9609 (CG9609, FBgn0030787). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:16679398..16681011. It has the cytological map location 15A8. Based on sequence similarity, it is predicted to have molecular function</span>: RNA polymerase III transcription factor activity. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    RNA polymerase III transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPGTQIASD SDMETALEEF KQRQGRRNSI GSAKYACSMP KCEATFKRLD QLDRHEYHHT  60
   61 GIKKHACSYE GCDKTYSIVT HLKRHLRSTH ERPESAAKKT VKCALEECSK MFISVSNMTR 120
  121 HMRETHESPK VYPCSQCSAK FSQKLKLKRH EIREHTLEYP YSCSKCSRGF YQQWQCQSHE 180
  181 PSCKLYECPG CPLQFDKWTL YTKHCRDSLH GKNRHKCDRC DSAFDKPSEL KRHLEVKHKE 240
  241 AAQTDECATS FTCNEEGCGK SYSYLRNLRQ HMLTAHSGRR FECQALDCGR CFSSAQNLAR 300
  301 HLLRDHKDGA TKKELKAKKK DKSKTGEGGK TKSTSRKRRR DAGRSKHSRL SKLACLQLDK 360
  361 EDDEAVRERQ PLVLEKITQS LKDDPVEELL AQTLQDEEEK EQE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..155] PSI-BLAST 22.0 Transcription factor IIIA, TFIIIA
    2 View Details [156..403] PSI-BLAST 53.522879 No description for 2i13A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.70988788192472 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.58713908116892 bayes_pls_golite062009
  • DNA binding
    		•  4.56219307357342 bayes_pls_golite062009
  • transcription factor activity
    		•  3.50954949535763 bayes_pls_golite062009
  • transcription repressor activity
    		•  3.27542149084008 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  3.22082323675675 bayes_pls_golite062009
  • binding
    		•  3.10743787485868 bayes_pls_golite062009
  • transcription activator activity
    		•  2.19952417915035 bayes_pls_golite062009
  • chromatin binding
    		•  2.18464662431232 bayes_pls_golite062009
  • protein binding
    		•  2.05530362750351 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  1.63161912031789 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.42975942698743 bayes_pls_golite062009
  • transcription factor binding
    		•  1.39608963544799 bayes_pls_golite062009
  • transcription corepressor activity
    		•  1.34049786451995 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.77874411480713 bayes_pls_golite062009
  • catalytic activity
    		•  0.245893663605433 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.240825841910931 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.0129353639725593 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle