Description(s) found:
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gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
[NCBI NR]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
[NCBI NR]
gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
[NCBI NR]
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
[NCBI NR]
(Q9VYS3) Regulator of nonsense transcripts 1 homolog
[Swiss-Prot]
Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster GN=Upf1 PE=1 SV=2
[Swiss-Prot]
type=protein; loc=X:complement(11795271..11795312,11795382..11798714,11798777..11798944); ID=FBpp0309612; name=Upf1-PB; parent=FBgn0030354,FBtr0342744; dbxref=FlyBase:FBpp0309612,FlyBase_Annotation_IDs:CG1559-PB; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r5.56; species=Dmel;
[FlyBase]
The gene Upf1 is referred to in FlyBase by the symbol Dmel\Upf1 (CG1559, FBgn0030354). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:11794470..11799373. It has the cytological map location 10F4. Based on sequence similarity, it is predicted to have molecular function</span>: helicase activity. There is experimental evidence that it is involved in the biological process</span>: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide.
[FlyBase]
>CG1559-PA translation from_gene[CG1559 Upf1 FBgn0030354] seq_release:3 mol_weight=129915 cds_boundaries:(X:11,631,899..11,635,569[-]) aa_length:1180 transcript_info:[CG1559-RA seq_release:3] gene_info:[gene symbol:Upf1 FBgn0030354 gene_boundaries:(X:1
[hmr_yeast5_DM3-1_pombe.fasta]
CG1559-PA [Drosophila melanogaster]gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]gi|18859757|ref|NP_572767.1| CG1559-PA [Drosophila melanogaster]gi|27923995|sp|Q9VYS3|RNT1_DROME Regulator of nonsense transcripts 1 homolog
[nrdb_11152004_Chlamydomonas]
type=protein; loc=X:complement(11795271..11795312,11795382..11798714,11798777..11798944); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_p
[fly-100309-contam.fasta]
LD30316p [Drosophila melanogaster]
[nr-271106-contam.fasta]
Regulator of nonsense transcripts 1 homolog
[nr-271106-contam.fasta]
Upf1 CG1559-PA [Drosophila melanogaster]
[nr-271106-contam.fasta]
CG1559-PA [Drosophila melanogaster]
[nr-271106-contam.fasta]
type=protein; loc=X:complement(11795271..11795312,11795382..11798714,11798777..11798944); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r5.16; species=Dmel;
[fly-contam-His-TEV-Tub4complex.fasta]
type=protein; loc=X:complement(11795271..11795312,11795382..11798714,11798777..11798944); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r5.21; species=Dmel;
[Other_drosophila_na_09-09-2009_reversed.fasta]
type=protein; loc=X:complement(11795271..11795312,11795382..11798714,11798777..11798944); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115,FlyMine:FBpp0073433,modMine:FBpp0073433; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r5.46; species=Dmel;
[fly-062812-sfps-sandra-contam.fasta]
type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115,FlyMine:FBpp0073433,modMine:FBpp0073433; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0309612; name=Upf1-PB; parent=FBgn0030354,FBtr0342744; dbxref=GB_protein:AHN59615,REFSEQ:NP_001285145,FlyBase:FBpp0309612,FlyBase_Annotation_IDs:CG1559-PB; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.02; species=Dmel;
[fly-2014-05-contam.fasta]
type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115,FlyMine:FBpp0073433,modMine:FBpp0073433; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0309612; name=Upf1-PB; parent=FBgn0030354,FBtr0342744; dbxref=GB_protein:AHN59615,REFSEQ:NP_001285145,FlyBase:FBpp0309612,FlyBase_Annotation_IDs:CG1559-PB; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.07; species=Dmel;
[fly-08202015-contam.fasta]
Isoform of Q9VYS3, Upf1, isoform B OS=Drosophila melanogaster GN=Upf1 PE=4 SV=1
[DROME.fasta.20160308]
FBpp0073433 type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115,FlyMine:FBpp0073433,modMine:FBpp0073433; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
FBpp0309612 type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0309612; name=Upf1-PB; parent=FBgn0030354,FBtr0342744; dbxref=GB_protein:AHN59615,REFSEQ:NP_001285145,FlyBase:FBpp0309612,FlyBase_Annotation_IDs:CG1559-PB; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.09; species=Dmel;
[dmel-all-translation-r6.09.fasta]
[fly-122215-dmel-6-09-contam.fasta]
type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0073433; name=Upf1-PA; parent=FBgn0030354,FBtr0073596; dbxref=FlyBase:FBpp0073433,FlyBase_Annotation_IDs:CG1559-PA,GB_protein:AAF48115.2,REFSEQ:NP_572767,GB_protein:AAF48115,UniProt/Swiss-Prot:Q9VYS3,FlyMine:FBpp0073433,modMine:FBpp0073433; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
type=protein; loc=X:complement(join(11904744..11904911,11901349..11904681,11901238..11901279)); ID=FBpp0309612; name=Upf1-PB; parent=FBgn0030354,FBtr0342744; dbxref=GB_protein:AHN59615,REFSEQ:NP_001285145,FlyBase:FBpp0309612,FlyBase_Annotation_IDs:CG1559-PB,UniProt/Swiss-Prot:Q9VYS3; MD5=0d1c3b90f9acbb265f6b829c72b870e6; length=1180; release=r6.14; species=Dmel;
[fly-dmel-jan2017-sandracontam.fasta]
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