| Protein: | FBpp0309612, Upf1-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1180 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0309612, Upf1-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1087.0 | [0..1] | [1162..577] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MSVDTYAPSS ALSFLDMDDN ELLPGADTQP TQYDYRDFTM PSTSQSQTQN DQLEIAQRCS 60
61 AGDSHPRLAS ITNDLADLQF EEEDDEPGS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [90-258] |
1 11 21 31 41 51
| | | | | |
1 SYVKELPPHA CKYCGIHDPA TVVMCNNCRK WFCNGRGSTS GSHIINHLVR AKHREVTLHG 60
61 EGPLGETILE CYSCGVRNVF VLGFIPAKAD SVVVLLCRQP CAAQNSLKDM NWDQEQWKPL 120
121 IADRCFLAWL VKQPSEQGQL RARQISAAQI NKLEELWKEN IEATFQDLE
|
| Detection Method: | |
| Confidence: | 75.30103 |
| Match: | 2iykA |
| Description: | No description for 2iykA was found. |
|
Region A: Residues: [259-907] |
1 11 21 31 41 51
| | | | | |
1 KPGIDSEPAH VLLRYEDGYQ YEKTFGPLVR LEAEYDQKLK ESATQENIEV RWDVGLNKKT 60
61 IAYFTLAKTD SDMKLMHGDE LRLHYVGELY NPWSEIGHVI KVPDNFGDDV GLELKSSTNA 120
121 PVKCTSNFTV DFIWKCTSFD RMTRALCKFA IDRNSVSNFI YSRLLGHGRA DSNDEVLFRG 180
181 PQPKLFSAPH LPDLNRSQVY AVKHALQRPL SLIQGPPGTG KTVTSATIVY QLVKLHGGTV 240
241 LVCAPSNTAV DQLTEKIHRT NLKVVRVCAK SREAIDSPVS FLALHNQIRN METNSELKKL 300
301 QQLKDETGEL SSADEKRYRN LKRAAENQLL EAADVICCTC VGAGDGRLSR VKFTSILIDE 360
361 SMQSTEPECM VPVVLGAKQL ILVGDHCQLG PVVMCKKAAR AGLSQSLFER LVVLGIRPFR 420
421 LEVQYRMHPE LSQFPSNFFY EGSLQNGVCA EDRRLKLDFP WPQPERPMFF LVTQGQEEIA 480
481 GSGTSFLNRT EAANVEKITT RFLKAGIKPE QIGIITPYEG QRAYLVQYMQ YQGSLHSRLY 540
541 QEIEIASVDA FQGREKDIII MSCVRSNERQ GIGFLNDPRR LNVALTRAKF GIIIVGNPKV 600
601 LAKQQLWNHL LNFYKDRKVL VEGSLNNLKE SLIHFQKPKK LVNSMNIGA
|
| Detection Method: | |
| Confidence: | 1000.0 |
| Match: | 2gjkA |
| Description: | No description for 2gjkA was found. |
|
Region A: Residues: [908-1180] |
1 11 21 31 41 51
| | | | | |
1 HFMSTIIADA KEVMVPGSIY DRSGGYGQGR QMVGQSMNGG QYGGSGGGPY GNSPLGYGTP 60
61 SSNSMVGFGL GNGGNGAAGG NNNFGGAGPS WAAAHLHHDS IGYISNEHGA AALGNMPVPV 120
121 GMFMNMSNIP PRFYNQHQQA IMAVKQNRAI QQQTGNFSPG NSGPGVTGVG VGRSATPGGN 180
181 KKTNKLGKSR VTGGGTGGAP LTQGSSVCNA APYSQHPMPL SLQMTQPSGF ALSQQPELSQ 240
241 DFGQISQMDG LLSQDVAFNA SGERSLNQFS QPY
|
| Detection Method: | |
| Confidence: | 36.30103 |
| Match: | 1y0fB |
| Description: | No description for 1y0fB was found. |
