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Protein Overview: Rpt4-PA

General Information:
Name(s) found: Rpt4-PA / FBpp0070890 [FlyBase]
Description(s) found:
Found 13 descriptions.
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  • The gene Rpt4 is referred to in FlyBase by the symbol Dmel\Rpt4 (CG3455, FBgn0028685). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6183501..6185276. It has the cytological map location 5E5. There is experimental evidence that it has the molecular function</span>: endopeptidase activity. There is experimental evidence that it is involved in the biological process</span>: proteolysis. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: proteasome regulatory particle, base subcomplex [ISS][NAS]
    cytoplasm [IEA]
    proteasome regulatory particle [IDA][ISS]
    Biological Process: proteolysis [IDA][ISS]
    Molecular Function: ATPase activity [ISS]
    ATP binding [IEA]
    endopeptidase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDNLRVKAL SEYRKKLLEH KEIEGRLKEK REEIKDLTKL YDKSENDLKA LQSVGQIVGE  60
   61 VLKQLTEDKF IVKATNGPRY VVGCRRQLDK AKLKSGTRVA LDMTTLTIMR YLPREVDPLV 120
  121 YNMSHEDPGD VTYSAIGGLT DQIRELREVI ELPLLNPELF LRVGITPPKG CLLYGPPGTG 180
  181 KTLLARAVAS QLDANFLKVV SSAIVDKYIG ESARLIREMF NYARDHQPCI IFMDEIDAIG 240
  241 GRRFSEGTSA DREIQRTLME LLNQMDGFDS LGQVKMIMAT NRPDTLDPAL LRPGRLDRKI 300
  301 EIPLPNEQAR LEILKIHALK IAKHGEIDYE AIVKLSDNFN GADLRNVCTE AGLFAIRAER 360
  361 EYVIQEDFMK AVRKVSDNKK LESKLDYKPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..390] PSI-BLAST 78.522879 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle