YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: FBpp0311758, tor...

General Information:
Name(s) found: FBpp0311758 [FlyBase]
torp4a-PA / FBpp0070658 [FlyBase]
Description(s) found:
Found 38 descriptions.
SHOW ALL
  • type=protein; loc=X:complement(4542718..4543547,4543606..4543798); ID=FBpp0311758; name=Torsin-PB; parent=FBgn0025615,FBtr0345715; dbxref=FlyBase:FBpp0311758,FlyBase_Annotation_IDs:CG3024-PB; MD5=e68ad3ad829a5d83fe2fa56d7be97379; length=340; release=r5.56; species=Dmel; [FlyBase]
  • The gene torp4a is referred to in FlyBase by the symbol Dmel\torp4a (CG3024, FBgn0025615). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:4542623..4543865. It has the cytological map location 4C11. Based on sequence similarity, it is predicted to have molecular function</span>: ATP binding; unfolded protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: protein folding. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 340 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum lumen [ISS][NAS]
    Biological Process: chaperone mediated protein folding requiring cofactor [IEA]
    protein folding [ISS][NAS]
    Molecular Function: ATP binding [ISS][NAS]
    unfolded protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSFPRMLSL CLSVLVILPL PLQSVDPLTI GAVGAVALGA YFKEHTYCRF AECCDDRNIP  60
   61 ARIDELERSL ERTLIGQHIV RQHIVPALKA HIASGNKSRK PLVISFHGQP GTGKNFVAEQ 120
  121 IADAMYLKGS RSNYVTKYLG QADFPKESEV SNYRVKINNA VRDTLRSCPR SLFIFDEVDK 180
  181 MPSGVFDQLT SLVDYNAFVD GTDNTKAIFI FLSNTAGSHI ASHLGSVMKN GRLREDTRLS 240
  241 DFEPLLRKAA YNMDGGMKKT TMIESHVIDH FIPFLPMEKA HVIKCLEAEL LRWRRDPKQA 300
  301 NNQKIIEDII NSSISYDRTH SLFAISGCKT LEKKVAMAIY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] PSI-BLAST 63.39794 Crystal Structure Analysis of ClpB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.05253348982328 bayes_pls_golite062009
  • hydrolase activity
    		•  1.1574342089649 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.948012599424412 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.946775815096981 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.943793957809966 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.923981227281218 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.901460716954519 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.569910969126728 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.568840867400671 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.568779924702229 bayes_pls_golite062009
  • nucleotide binding
    		•  0.564275755355315 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.489468237062011 bayes_pls_golite062009
  • DNA binding
    		•  0.341209040153805 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.208665086324262 bayes_pls_golite062009
  • ATP binding
    		•  0.1860481660648 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.152859582615242 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.138615225841109 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle