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Protein Overview: fs(1)N-PA

General Information:
Name(s) found: fs(1)N-PA / FBpp0070200 [FlyBase]
Description(s) found:
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  • pir||T13612 hypothetical protein 8D8.1 - fruit fly (Drosophila melanogaster) [NCBI NR]
  • gi|7290139|gb|AAF45603.1| female sterile (1) nasrat [Drosophila melanogaster] [NCBI NR]
  • gi|2961394|emb|CAA17682.1| EG:8D8.1 [Drosophila melanogaster] [NCBI NR]
  • gi|21392082|gb|AAM48395.1| RE10379p [Drosophila melanogaster] [NCBI NR]
  • gi|20128855|ref|NP_569901.1| female sterile (1) nasrat [Drosophila melanogaster] [NCBI NR]
  • The gene female sterile (1) Nasrat is referred to in FlyBase by the symbol Dmel\fs(1)N (CG11411, FBgn0004650). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1216558..1223487. It has the cytological map location 1F3. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: chorion-containing eggshell formation; terminal region determination; vitelline membrane formation in chorion-containing eggshell. 28 alleles are reported. The phenotypes of these alleles are annotated with 20 unique terms, many of which group under: anatomical structure; embryonic abdomen; organ system; embryonic segment; egg; adult segment; abdominal segment 10; abdominal segment 8; adult mesothoracic segment; embryonic tagma. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG11411-PA translation from_gene[CG11411 fs(1)N FBgn0004650] seq_release:3 mol_weight=238767 cds_boundaries:(X:1,080,011..1,086,709[+]) aa_length:2118 transcript_info:[CG11411-RA seq_release:3] gene_info:[gene symbol:fs(1)N FBgn0004650 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • (O76904) EG:8D8.1 protein (RE10379p) [DrosMelano7227.FASTAC.txt]
  • (AE003420) EG:8D8.1 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11411-PA [Drosophila melanogaster]gi|21392082|gb|AAM48395.1| RE10379p [Drosophila melanogaster]gi|20128855|ref|NP_569901.1| CG11411-PA [Drosophila melanogaster]gi|7511929|pir||T13612 hypothetical protein 8D8.1 - fruit fly (Drosophila melanogaster)gi [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(1216607..1216747,1216806..1218842,1218901..1219030,1219088..1219218,1219277..1221047,1221102..1221310,1221371..1223308); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation [fly-100309-contam.fasta]
  • RE10379p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • EG:8D8.1 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • female sterile (1) Nasrat CG11411-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11411-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(1216607..1216747,1216806..1218842,1218901..1219030,1219088..1219218,1219277..1221047,1221102..1221310,1221371..1223308); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(1216607..1216747,1216806..1218842,1218901..1219030,1219088..1219218,1219277..1221047,1221102..1221310,1221371..1223308); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • EG:8D8.1 protein OS=Drosophila melanogaster GN=fs(1)N PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(1216607..1216747,1216806..1218842,1218901..1219030,1219088..1219218,1219277..1221047,1221102..1221310,1221371..1223308); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603,FlyMine:FBpp0070200,modMine:FBpp0070200; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(1322574..1322714,1322773..1324809,1324868..1324997,1325055..1325185,1325244..1327014,1327069..1327277,1327338..1329275); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603,FlyMine:FBpp0070200,modMine:FBpp0070200; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(1322574..1322714,1322773..1324809,1324868..1324997,1325055..1325185,1325244..1327014,1327069..1327277,1327338..1329275); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603,FlyMine:FBpp0070200,modMine:FBpp0070200; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0070200 type=protein; loc=X:join(1322574..1322714,1322773..1324809,1324868..1324997,1325055..1325185,1325244..1327014,1327069..1327277,1327338..1329275); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603,FlyMine:FBpp0070200,modMine:FBpp0070200; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(1322574..1322714,1322773..1324809,1324868..1324997,1325055..1325185,1325244..1327014,1327069..1327277,1327338..1329275); ID=FBpp0070200; name=fs(1)N-PA; parent=FBgn0004650,FBtr0070207; dbxref=FlyBase:FBpp0070200,FlyBase_Annotation_IDs:CG11411-PA,GB_protein:AAF45603.1,REFSEQ:NP_569901,GB_protein:AAF45603,UniProt/TrEMBL:O76904,FlyMine:FBpp0070200,modMine:FBpp0070200; MD5=b29cde275fe0538e300bc8b7ceed8652; length=2118; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 2118 amino acids

    Gene Ontology:
    Cellular Component: germline ring canal [IDA]
    cytoplasm [IDA]
    external side of plasma membrane [IDA]
    extracellular region [ISS]
    Biological Process: eggshell chorion assembly [NAS]
    terminal region determination [IMP]
    anterior/posterior axis specification, embryo [TAS]
    oogenesis [TAS]
    chorion-containing eggshell formation [IEP][IMP]
    vitelline membrane formation in chorion-containing eggshell [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIWHLLLWP ALIASAPPRP LTDQKAEVAK LRSELEKALE HDDGGAPPGV VVAPTWTQQA  60
   61 GQMPLGKTSK VVVDHSSLSS ASAIRQEIQQ AVAHQGQNQE VLQLEALLKA RGSSKESTAQ 120
  121 VSTSRQEVLG ATVQEANVVE SHSTSQTVDL EQLQRLELSK RRTRDMLVLG RIEELLNYSM 180
  181 PTDVDRWLTL QANGSVFLVG QQQEGLLVLS EEFTPLQSYV HPFPITAMLG TDRWNRRVHM 240
  241 QEGLLVMASQ DQLIWLRLEP SLGLKPIWHW TIGSHVTKIR AFNMEGQDYL ALVANHTLNI 300
  301 YVYDLEAEEF WIAQRVQMAE TISNLAILDT GRELLLAVGQ WDEVLIYACT SKGQPLHLRQ 360
  361 QVAAPEVAGV TAFQMGGRSY LALGGIMPQI LVYVQGQLVP RTILGQNFGF VDHYLPIPVR 420
  421 SYRDDLLLLV QHRVVFDTHS LLVLEVLVWN GEAFEAGLPP PCGTAYGAGC MLDQDREAGI 480
  481 SGAVLLRRST NQPPLVVVPR KEAPTGIFVL ETQLLARNSE TQDLLEIRQF MQDWVHEQEE 540
  541 LIQLAEELLA EKSESQYIEE LSTPLVVSEG GTVEELFVNE ARWTGADAVV DVSSLLQQIL 600
  601 LLDGEMSSRR SKRQPETLFN FHYEQLEVEA VDSVELNLEK LNHETFYIRN GSLDLHLGTL 660
  661 NVQQLELLEA PKLELVPVHG AESYKILKMA TDLDSIFINE MEWDKLLQDL VWRHQPLKLS 720
  721 QLHVEGPVIF EDVLSLHSLN DLSFPGDYLW SQGNETSVVQ APKEFTQTLS ANAVDTTGTI 780
  781 NAVYPHDVIT LSDSQEWPGL VTFSHLEVSE ELELNGSAQG RQFEEAPLNP TLLESRVISA 840
  841 DCHFEQLLVR GPLRLLGKVD NDSFGSLLGD LVQRSPNSAQ ELQISGQKRV DQLLLPVDAH 900
  901 IADNQLSGIF LNDFVTKHTP QTLSNLSQLG GYVYFHQLEL GKESSYDGVR LEELLSKSLR 960
  961 LDSPFPLSSP HTRLRFVGHA PNFTRLQVEN TLNKVPLSSG YQLLHEPLHL GRANFSRLMA1020
 1021 GQAQVNYDVS GNGLLNGRSL IRILQEQPRT WSGEVHVQEL ILPQGVQANQ LQGIKADLLL1080
 1081 DFLQQLDELP LLILQGRIQV ERIAVNGSVQ AAETLNMQPF HELQRQVVWL DRQNELGTRW1140
 1141 VLKESPQFQQ NLQVLGSFNE RLLPELLDDI VLRSDAHEVL IEGTKSFLAP VNTKELHLAA1200
 1201 LNGIPFNHMA NKLSPLHLTG NVRIQGRIFV EDLQLNGQVN GDPDIPADLQ KLLRWDPNAG1260
 1261 GFVHRGVVEL PKKELERLVV LGHLKNRSRE PVQELFDQLV FKQQRGIHLH GHKTFTGRLR1320
 1321 IEDGAHIKFF NGRNLEQFLE NLIYVDSQGE IRLETPVRFA ADVKMDHLEA DRLVLSGELL1380
 1381 NGCNVSQWLR DTIRVDRDFQ QPEIAFAKGS LDGNFLEVEE LNEVNLSLVV TRFTEQQLSD1440
 1441 PLEADDLLLD GQLVVRGTVN GYNLPEEYAN TLMINPLREQ QVDTPLLLSN IFVTGPLEVT1500
 1501 APVHGLNISD VAILGEDPVL LQSPLYFDTL HAPFLRAQQN INGFDFRAWY GGSLWARGRE1560
 1561 QQEISGNWRV KKLQVKQGDE LRPRRQTAEE SYREFCEGLV RILLPYKVQK LRRRFDLNQE1620
 1621 RDQENIRRVF ALEAPGGISY LLINERGCWT RIHRWNGSLF DRSGAFKSGP VDEAVALRVG1680
 1681 NTSSNQDFAF MTSYELQDDQ NEPSLNCSAV KPILLSWNLN KTKSTTEHME LSADTLRNLK1740
 1741 DQYEQLKNQP LPNPSYQQAF KYLQRPSIKS QLGSQWQENK HELSPSEMAR MRRRLLDTLE1800
 1801 FRLQAEVNIT QLSIPESDLF DEHLVEDFLE LMRQLRTLRR RLDTETLPLP NTPARVLAAR1860
 1861 SAQLIWPTLQ ELREVSSGND SSFQEQVLEQ TLLDVLMLAN EENGSGDDEK LHAVIQRLRN1920
 1921 LKGELQGQEE DDEGPAASYS DRNEQRLPLP EVDWRPIQTL RLAVGPANRP RLLYARLTVV1980
 1981 TPTDGPPPTT PSTAPAAHIQ LHHANGSLFQ TLAGEHGARH LTSLRVRDET LLAFMEGCCR2040
 2041 IRVLIYRGVQ GFVDFVRFPA PAQEAKSGDG EVLQLLSLRL PLNRPPGAMY LLAVVQARRV2100
 2101 TFYEVVVAGL LEPWLQCP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] deduced N/A No confident structure predictions are available.
    2 View Details [149..321] deduced N/A No confident structure predictions are available.
    3 View Details [322..561] deduced N/A No confident structure predictions are available.
    4 View Details [562..668] deduced N/A No confident structure predictions are available.
    5 View Details [669..818] deduced N/A No confident structure predictions are available.
    6 View Details [819..1558] PSI-BLAST 4.69897 Crystal structure of Heme Binding protein, an autotransporter hemoglobine protease from pathogenic Escherichia coli
    7 View Details [1559..1703] deduced N/A No confident structure predictions are available.
    8 View Details [1704..1934] deduced N/A No confident structure predictions are available.
    9 View Details [1935..2118] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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