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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: fs(1)N-PA
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIWHLLLWP ALIASAPPRP LTDQKAEVAK LRSELEKALE HDDGGAPPGV VVAPTWTQQA  60
   61 GQMPLGKTSK VVVDHSSLSS ASAIRQEIQQ AVAHQGQNQE VLQLEALLKA RGSSKESTAQ 120
  121 VSTSRQEVLG ATVQEANVVE SHSTSQTVDL EQLQRLELSK RRTRDMLVLG RIEELLNYSM 180
  181 PTDVDRWLTL QANGSVFLVG QQQEGLLVLS EEFTPLQSYV HPFPITAMLG TDRWNRRVHM 240
  241 QEGLLVMASQ DQLIWLRLEP SLGLKPIWHW TIGSHVTKIR AFNMEGQDYL ALVANHTLNI 300
  301 YVYDLEAEEF WIAQRVQMAE TISNLAILDT GRELLLAVGQ WDEVLIYACT SKGQPLHLRQ 360
  361 QVAAPEVAGV TAFQMGGRSY LALGGIMPQI LVYVQGQLVP RTILGQNFGF VDHYLPIPVR 420
  421 SYRDDLLLLV QHRVVFDTHS LLVLEVLVWN GEAFEAGLPP PCGTAYGAGC MLDQDREAGI 480
  481 SGAVLLRRST NQPPLVVVPR KEAPTGIFVL ETQLLARNSE TQDLLEIRQF MQDWVHEQEE 540
  541 LIQLAEELLA EKSESQYIEE LSTPLVVSEG GTVEELFVNE ARWTGADAVV DVSSLLQQIL 600
  601 LLDGEMSSRR SKRQPETLFN FHYEQLEVEA VDSVELNLEK LNHETFYIRN GSLDLHLGTL 660
  661 NVQQLELLEA PKLELVPVHG AESYKILKMA TDLDSIFINE MEWDKLLQDL VWRHQPLKLS 720
  721 QLHVEGPVIF EDVLSLHSLN DLSFPGDYLW SQGNETSVVQ APKEFTQTLS ANAVDTTGTI 780
  781 NAVYPHDVIT LSDSQEWPGL VTFSHLEVSE ELELNGSAQG RQFEEAPLNP TLLESRVISA 840
  841 DCHFEQLLVR GPLRLLGKVD NDSFGSLLGD LVQRSPNSAQ ELQISGQKRV DQLLLPVDAH 900
  901 IADNQLSGIF LNDFVTKHTP QTLSNLSQLG GYVYFHQLEL GKESSYDGVR LEELLSKSLR 960
  961 LDSPFPLSSP HTRLRFVGHA PNFTRLQVEN TLNKVPLSSG YQLLHEPLHL GRANFSRLMA1020
 1021 GQAQVNYDVS GNGLLNGRSL IRILQEQPRT WSGEVHVQEL ILPQGVQANQ LQGIKADLLL1080
 1081 DFLQQLDELP LLILQGRIQV ERIAVNGSVQ AAETLNMQPF HELQRQVVWL DRQNELGTRW1140
 1141 VLKESPQFQQ NLQVLGSFNE RLLPELLDDI VLRSDAHEVL IEGTKSFLAP VNTKELHLAA1200
 1201 LNGIPFNHMA NKLSPLHLTG NVRIQGRIFV EDLQLNGQVN GDPDIPADLQ KLLRWDPNAG1260
 1261 GFVHRGVVEL PKKELERLVV LGHLKNRSRE PVQELFDQLV FKQQRGIHLH GHKTFTGRLR1320
 1321 IEDGAHIKFF NGRNLEQFLE NLIYVDSQGE IRLETPVRFA ADVKMDHLEA DRLVLSGELL1380
 1381 NGCNVSQWLR DTIRVDRDFQ QPEIAFAKGS LDGNFLEVEE LNEVNLSLVV TRFTEQQLSD1440
 1441 PLEADDLLLD GQLVVRGTVN GYNLPEEYAN TLMINPLREQ QVDTPLLLSN IFVTGPLEVT1500
 1501 APVHGLNISD VAILGEDPVL LQSPLYFDTL HAPFLRAQQN INGFDFRAWY GGSLWARGRE1560
 1561 QQEISGNWRV KKLQVKQGDE LRPRRQTAEE SYREFCEGLV RILLPYKVQK LRRRFDLNQE1620
 1621 RDQENIRRVF ALEAPGGISY LLINERGCWT RIHRWNGSLF DRSGAFKSGP VDEAVALRVG1680
 1681 NTSSNQDFAF MTSYELQDDQ NEPSLNCSAV KPILLSWNLN KTKSTTEHME LSADTLRNLK1740
 1741 DQYEQLKNQP LPNPSYQQAF KYLQRPSIKS QLGSQWQENK HELSPSEMAR MRRRLLDTLE1800
 1801 FRLQAEVNIT QLSIPESDLF DEHLVEDFLE LMRQLRTLRR RLDTETLPLP NTPARVLAAR1860
 1861 SAQLIWPTLQ ELREVSSGND SSFQEQVLEQ TLLDVLMLAN EENGSGDDEK LHAVIQRLRN1920
 1921 LKGELQGQEE DDEGPAASYS DRNEQRLPLP EVDWRPIQTL RLAVGPANRP RLLYARLTVV1980
 1981 TPTDGPPPTT PSTAPAAHIQ LHHANGSLFQ TLAGEHGARH LTSLRVRDET LLAFMEGCCR2040
 2041 IRVLIYRGVQ GFVDFVRFPA PAQEAKSGDG EVLQLLSLRL PLNRPPGAMY LLAVVQARRV2100
 2101 TFYEVVVAGL LEPWLQCP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle