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Protein Overview: sda-PA

General Information:
Name(s) found: sda-PA / FBpp0084438 [FlyBase]
Description(s) found:
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  • gi|28571901|ref|NP_652744.2| slamdance, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|28381473|gb|AAF56639.3| slamdance, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|21483240|gb|AAM52595.1| AT30002p [Drosophila melanogaster] [NCBI NR]
  • gi|19224210|gb|AAL86442.1|AF480087_1 slamdance [Drosophila melanogaster] [NCBI NR]
  • The gene slamdance is referred to in FlyBase by the symbol Dmel\sda (CG5518, FBgn0015541). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22741455..22771035. It has the cytological map location 97D7-97D9. Based on sequence similarity, it is predicted to have molecular function</span>: aminopeptidase activity. There is experimental evidence that it is involved in the biological process</span>: response to mechanical stimulus; mechanosensory behavior. 16 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG5518-PA translation from_gene[CG5518 sda FBgn0015541] seq_release:3 mol_weight=121702 cds_boundaries:(3R:22,740,324..22,759,607[+]) aa_length:1071 transcript_info:[CG5518-RA seq_release:3] gene_info:[gene symbol:sda FBgn0015541 gene_boundaries:(3R:2 [hmr_yeast5_DM3-1_pombe.fasta]
  • (AAF56639) CG5518-PA [DrosMelano7227.FASTAC.txt]
  • CG5518-PA [Drosophila melanogaster]gi|21483240|gb|AAM52595.1| AT30002p [Drosophila melanogaster]gi|19224210|gb|AAL86442.1| slamdance [Drosophila melanogaster]gi|28571901|ref|NP_652744.2| CG5518-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • slamdance [Drosophila melanogaster] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • type=protein; loc=3R:join(22750959..22750983,22764167..22764353,22764655..22764972,22767184..22767555,22767615..22769045,22769108..22769231,22769294..22769484,22769549..22769716,22769779..22769922,22769990..22770245); ID=FBpp0084438; name=sda-PA; parent=F [fly-100309-contam.fasta]
  • AT30002p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG5518-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • slamdance CG5518-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(22750959..22750983,22764167..22764353,22764655..22764972,22767184..22767555,22767615..22769045,22769108..22769231,22769294..22769484,22769549..22769716,22769779..22769922,22769990..22770245); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(22750959..22750983,22764167..22764353,22764655..22764972,22767184..22767555,22767615..22769045,22769108..22769231,22769294..22769484,22769549..22769716,22769779..22769922,22769990..22770245); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • AT30002p OS=Drosophila melanogaster GN=sda PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(22750959..22750983,22764167..22764353,22764655..22764972,22767184..22767555,22767615..22769045,22769108..22769231,22769294..22769484,22769549..22769716,22769779..22769922,22769990..22770245); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639,FlyMine:FBpp0084438,modMine:FBpp0084438; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:join(26925237..26925261,26938445..26938631,26938933..26939250,26941462..26941833,26941893..26943323,26943386..26943509,26943572..26943762,26943827..26943994,26944057..26944200,26944268..26944523); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639,FlyMine:FBpp0084438,modMine:FBpp0084438; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(26925237..26925261,26938445..26938631,26938933..26939250,26941462..26941833,26941893..26943323,26943386..26943509,26943572..26943762,26943827..26943994,26944057..26944200,26944268..26944523); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639,FlyMine:FBpp0084438,modMine:FBpp0084438; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of A0A0B4KH77, AT30002p OS=Drosophila melanogaster GN=sda PE=2 SV=2 [DROME.fasta.20160308]
  • FBpp0084438 type=protein; loc=3R:join(26925237..26925261,26938445..26938631,26938933..26939250,26941462..26941833,26941893..26943323,26943386..26943509,26943572..26943762,26943827..26943994,26944057..26944200,26944268..26944523); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639,FlyMine:FBpp0084438,modMine:FBpp0084438; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(26925237..26925261,26938445..26938631,26938933..26939250,26941462..26941833,26941893..26943323,26943386..26943509,26943572..26943762,26943827..26943994,26944057..26944200,26944268..26944523); ID=FBpp0084438; name=sda-PA; parent=FBgn0015541,FBtr0085066; dbxref=FlyBase:FBpp0084438,FlyBase_Annotation_IDs:CG5518-PA,GB_protein:AAF56639.3,REFSEQ:NP_652744,GB_protein:AAF56639,UniProt/TrEMBL:Q9VBA3,FlyMine:FBpp0084438,modMine:FBpp0084438; MD5=28ac2356a5df48d16f2d952128f3df2b; length=1071; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 1071 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: mechanosensory behavior [IMP]
    proteolysis [IEA]
    response to mechanical stimulus [IGI][IMP]
    Molecular Function: zinc ion binding [IEA]
    aminopeptidase activity [ISS]
    metallopeptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGYVNEGG QLKTKNGQKY VFNGPPSGVY VSKACLIIAA FITVLALLFT IAITYFVTRQ  60
   61 GLNPKEVTPP SCITADHPDV NATPIQTAGW VSMNSPPPLQ AATPTPMASP TPTNTPTVTT 120
  121 TLAMPASSEK PEIRMVDPKV GDIPVVEPAA GEVEDNTTKP INRPLKLYEG WRPLHYSLLI 180
  181 EPSVATSISN GSLTIEIERD VSKVTSWEPI VLDVHNVSIS NVRVIRALAD GASNASEEQD 240
  241 LDFDSDYGED NATFVINLSK TLAVETQLRV LLSLDFVSQV TDTLQGIYKT SYTNPDTKNE 300
  301 EWMISTQFSP VDARRAFPCF DRPDMKANFS ISIVRPMQFK MALSNMPKSG SRRFRRGFIR 360
  361 DDFETTPKMP TYLVAFIVSN MVDSRLASQD SGLTPRVEIW TRPQFVGMTH YAYKMVRKFL 420
  421 PYYEDFFGIK NKLPKIDLVS VPDFGFAAME NWGLITFRDS ALLVPEDLQL ASSSEHMQVV 480
  481 AGIIAHELAH QWFGNLVTPK WWDDLWLKEG FACYMSYKAL EHAHPEFQSM DTLTMLEFKE 540
  541 SMEHDADNTS HAISFDVRST NDVRRIFDPI SYSKGTILLR MLNSIVGDVA FRSATRDLLK 600
  601 KFAYGNMDRD DLWAMLTRHG HEQGTLPKDL SVKQIMDSWI TQPGYPVVNV ERRGADLVLR 660
  661 QERYLLPSKN TADQSTWFIP ITFETDELRK GDNIPTHWMR SEDEEELIVG NVFAHSSNSD 720
  721 NVIYLNLNRQ GYYRVNYDMT SWLALKKNFS TLPRITRAQL LDDALHLSQA EYLTYDIPLT 780
  781 FLMELFDAVD DELLWIAAKP GLNYLIYNLK REPAYETFRA FMKFIVRPAF DHYGLHEPDN 840
  841 ESHLQLKHRA LVAYFACKFN YDRCTQKAQM KFREWMRDPK NNPIKPNLKS VIYCTSLAEG 900
  901 SSPEWYFAYK QYKTTTSASE KEEILTSLGC TTKPWLLSKY LNMTINPTSG ILKQDGALAF 960
  961 RAVASNAIGH EIAFDFLQGN IKEIVEYYGD GFSTLSEMIK SLTIYMNKDY HKHQLLDLAA1020
 1021 TCRKLGLHAV ESAIELALEQ VNNNIYWRSH SYHSLKNFLE GIVSEFQINI F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] MSA 16.616996 View MSA. No confident structure predictions are available.
    2 View Details [163..1071] PSI-BLAST 134.0 Crystal structures of the tricorn interacting facor F3 from Thermoplasma acidophilum, a zinc aminopeptidase in three different conformations


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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