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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: sda-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGYVNEGG QLKTKNGQKY VFNGPPSGVY VSKACLIIAA FITVLALLFT IAITYFVTRQ  60
   61 GLNPKEVTPP SCITADHPDV NATPIQTAGW VSMNSPPPLQ AATPTPMASP TPTNTPTVTT 120
  121 TLAMPASSEK PEIRMVDPKV GDIPVVEPAA GEVEDNTTKP INRPLKLYEG WRPLHYSLLI 180
  181 EPSVATSISN GSLTIEIERD VSKVTSWEPI VLDVHNVSIS NVRVIRALAD GASNASEEQD 240
  241 LDFDSDYGED NATFVINLSK TLAVETQLRV LLSLDFVSQV TDTLQGIYKT SYTNPDTKNE 300
  301 EWMISTQFSP VDARRAFPCF DRPDMKANFS ISIVRPMQFK MALSNMPKSG SRRFRRGFIR 360
  361 DDFETTPKMP TYLVAFIVSN MVDSRLASQD SGLTPRVEIW TRPQFVGMTH YAYKMVRKFL 420
  421 PYYEDFFGIK NKLPKIDLVS VPDFGFAAME NWGLITFRDS ALLVPEDLQL ASSSEHMQVV 480
  481 AGIIAHELAH QWFGNLVTPK WWDDLWLKEG FACYMSYKAL EHAHPEFQSM DTLTMLEFKE 540
  541 SMEHDADNTS HAISFDVRST NDVRRIFDPI SYSKGTILLR MLNSIVGDVA FRSATRDLLK 600
  601 KFAYGNMDRD DLWAMLTRHG HEQGTLPKDL SVKQIMDSWI TQPGYPVVNV ERRGADLVLR 660
  661 QERYLLPSKN TADQSTWFIP ITFETDELRK GDNIPTHWMR SEDEEELIVG NVFAHSSNSD 720
  721 NVIYLNLNRQ GYYRVNYDMT SWLALKKNFS TLPRITRAQL LDDALHLSQA EYLTYDIPLT 780
  781 FLMELFDAVD DELLWIAAKP GLNYLIYNLK REPAYETFRA FMKFIVRPAF DHYGLHEPDN 840
  841 ESHLQLKHRA LVAYFACKFN YDRCTQKAQM KFREWMRDPK NNPIKPNLKS VIYCTSLAEG 900
  901 SSPEWYFAYK QYKTTTSASE KEEILTSLGC TTKPWLLSKY LNMTINPTSG ILKQDGALAF 960
  961 RAVASNAIGH EIAFDFLQGN IKEIVEYYGD GFSTLSEMIK SLTIYMNKDY HKHQLLDLAA1020
 1021 TCRKLGLHAV ESAIELALEQ VNNNIYWRSH SYHSLKNFLE GIVSEFQINI F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle