YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: dan-PA, FBpp0303321

General Information:
Name(s) found: FBpp0303321 [FlyBase]
dan-PA / FBpp0084178 [FlyBase]
Description(s) found:
Found 28 descriptions.
SHOW ALL
  • type=protein; loc=3R:21015661..21017697; ID=FBpp0303321; name=dan-PC; parent=FBgn0039286,FBtr0330289; dbxref=FlyBase:FBpp0303321,FlyBase_Annotation_IDs:CG11849-PC,REFSEQ:NP_001262949,GB_protein:AGB96329; MD5=81e7352f2b4359a1bc3123c2c05437c0; length=678; release=r5.56; species=Dmel; [FlyBase]
  • The gene distal antenna is referred to in FlyBase by the symbol Dmel\dan (CG11849, FBgn0039286). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21010735..21018528. It has the cytological map location 96C3-96C4. There is experimental evidence that it has the molecular function</span>: transcription factor activity; protein binding. There is experimental evidence that it is involved in the biological process</span>: segment specification; compound eye development; regulation of transcription. 12 alleles are reported. The phenotypes of these alleles are annotated with: unguis; eye; antenna; interommatidial bristle; rostral membrane; wing; arista; ommatidium; antennal segment 3; wing hinge. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chromosome, centromeric region [IEA]
    Biological Process: regulation of transcription [IMP]
    compound eye development [IMP]
    segment specification [IMP]
    Molecular Function: DNA binding [NAS]
    transcription factor activity [IMP]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIRMGTKGK RPLRSLTPRD KIHAIQRIHD GESKASVARD IGVPESTLRG WCKNEDKLRF  60
   61 MSRQSATDNL CADALGDKMD GGGGGGGGAG GGGLLGPPEK RQRLDGALPL NFSNKLKFDE 120
  121 LAFKRSPLNG LDYSTNKNLA DLGYNGLPVD YAAFNGGVKA KVFGADINRP AADPSLNAIS 180
  181 PLSSLTHLSG LTGISQSPLA ISFNELTTNL NLLAQLNPGL AAMSGLNSFP AGAGNLRTPK 240
  241 PSGQTPLQVQ SPRSDSGDRS AQGLSVKNWA KQKPGEGQGS LNLSIKNEGK GGDIKSPSPS 300
  301 IAPSQMGGPM TLSNLAEDPL LYWLKSQQTM LGLNPLYPPT IPMGVTSPPI RSSTPQHMSQ 360
  361 LAQTPPIPSA PLTPSSTPSG SLDEKNAAWY NWCKAFGASL HTLNPNAATL AALQANQLQQ 420
  421 QVATTAAEGG SMGDPSNILY SHLTKETETP SVRSLSSNEQ NPEADEATET DLDGEVEPEA 480
  481 SGKPEDLSAA GKVMTPSQSP IAHSSGSRSP EPKAKTKTPE TTNSTSECKK ILDNMLFKMG 540
  541 GMEATGPLMP EQGSSESEGS FQDTSNPHTN NNDVSASNNN NNNNSNKTDE EEKAKYLDCT 600
  601 ADEDIEAIRH GEKFLQWLEN CSNPRVTAVQ LMQLRFLIAA IKSGNETPMI EKSALPEDSE 660
  661 EHAAEEEGSG RGKSRRRK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] FFAS03 2.11 DNA-binding domain of centromere binding protein B (CENP-B)
    2 View Details [175..324] deduced N/A No confident structure predictions are available.
    3 View Details [325..577] MSA 5.168993 View MSA. No confident structure predictions are available.
    4 View Details [578..678] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.86538715425734 bayes_pls_golite062009
  • DNA binding
    		•  4.40186699787632 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.98153794570167 bayes_pls_golite062009
  • transcription factor activity
    		•  3.78935192723648 bayes_pls_golite062009
  • binding
    		•  2.92574888336072 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  2.15328641013602 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.00875399167309 bayes_pls_golite062009
  • transcription repressor activity
    		•  1.69615348178304 bayes_pls_golite062009
  • transcription activator activity
    		•  1.5973137667873 bayes_pls_golite062009
  • transcription factor binding
    		•  1.24678737091956 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.865913662624162 bayes_pls_golite062009
  • protein binding
    		•  0.795494287543952 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.691780246385357 bayes_pls_golite062009
  • chromatin binding
    		•  0.65622150362507 bayes_pls_golite062009
  • transcription corepressor activity
    		•  0.0723215858239072 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle