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Protein Overview: CG31381-PA, FBpp...

General Information:
Name(s) found: FBpp0292532 [FlyBase]
CG31381-PA / FBpp0084088 [FlyBase]
Description(s) found:
Found 29 descriptions.
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  • type=protein; loc=3R:20703074..20704507; ID=FBpp0292532; name=CG31381-PB; parent=FBgn0043799,FBtr0303480; dbxref=FlyBase:FBpp0292532,FlyBase_Annotation_IDs:CG31381-PB,REFSEQ:NP_001189283,GB_protein:ADV37373; MD5=16a66bba8d3177fac364c0f47381f3ab; length=477; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG31381 (CG31381, FBgn0043799). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20702943..20704507. It has the cytological map location 96B2. Based on sequence similarity, it is predicted to have molecular function</span>: tRNA isopentenyltransferase activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: tRNA processing. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 477 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: tRNA processing [ISS]
    Molecular Function: ATP binding [IEA]
    zinc ion binding [IEA]
    tRNA isopentenyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRKVPLIVV LGSTGTGKTK LSLQLAERFG GEIISADSMQ VYTHLDIATA KATKEEQSRA  60
   61 RHHLLDVATP AEPFTVTHFR NAALPIVERL LAKDTSPIVV GGTNYYIESL LWDILVDSDV 120
  121 KPDEGKHSGE HLKDAELNAL STLELHQHLA KIDAGSANRI HPNNRRKIIR AIEVYQSTGQ 180
  181 TLSQMLAEQR AQPGGNRLGG PLRYPHIVLL WLRCQQDVLN ERLDSRVDGM LAQGLLPELR 240
  241 QFHNAHHATT VQAYTSGVLQ TIGYKEFIPY LIKYDQQQDE KIEEYLKTHS YKLPGPEKLK 300
  301 EEGLPDGLEL LRNCCEELKL VTRRYSKKQL KWINNRFLAS KDRQVPDLYE LDTSDVSAWQ 360
  361 VAVYKRAETI IESYRNEEAC EILPMAKREH PGADLDEETS HFCQICERHF VGEYQWGLHM 420
  421 KSNKHKRRKE GQRKRQRDHE TMLSTDLAKK QKEEKEEAGK AETQPPPSRV NDTDKAM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..356] PSI-BLAST 78.39794 No description for 2qgnA was found.
    2 View Details [357..477] FFAS03 3.01 Solution Structure of a Human C2H2-type Zinc Finger Protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  3.37529385176635 bayes_pls_golite062009
  • DNA binding
    		•  3.3049326844117 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.24981360535232 bayes_pls_golite062009
  • binding
    		•  2.79894364685962 bayes_pls_golite062009
  • transcription factor activity
    		•  2.44389510173662 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.57041104288348 bayes_pls_golite062009
  • transcription activator activity
    		•  1.20323819132961 bayes_pls_golite062009
  • protein binding
    		•  0.852654490075478 bayes_pls_golite062009
  • RNA binding
    		•  0.84315767580466 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.732558534458316 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.686318575498149 bayes_pls_golite062009
  • chromatin binding
    		•  0.626365497850853 bayes_pls_golite062009
  • transcription factor binding
    		•  0.515821187939278 bayes_pls_golite062009
  • catalytic activity
    		•  0.263007611601737 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  0.200483461579207 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.113925660147477 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.0855506955761403 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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