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Protein Overview: FBpp0305403, FBp...

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..183] PSI-BLAST 53.0 Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI)
2 View Details [184..330] FFAS03 4.08 NMR Structure of RRM2 from Human Polypyrimidine Tract Binding Protein Isoform 1 (PTB1)
3 View Details [331..470] PSI-BLAST 7.30103 Sec24

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 6.73097473547076 bayes_pls_golite062009
  • 6.62953239642182 bayes_pls_golite062009
  • mRNA binding
  • 5.29759606920196 bayes_pls_golite062009
  • nucleic acid binding
  • 4.92126426323641 bayes_pls_golite062009
  • U1 snRNA binding
  • 4.22094068431436 bayes_pls_golite062009
  • snRNA binding
  • 4.06596327298973 bayes_pls_golite062009
  • binding
  • 3.64400841800969 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 3.11990160533699 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.93798024346416 bayes_pls_golite062009
  • transcription regulator activity
  • 2.18211199677674 bayes_pls_golite062009
  • DNA binding
  • 1.8021593476478 bayes_pls_golite062009
  • structural molecule activity
  • 1.56454315220334 bayes_pls_golite062009
  • U2 snRNA binding
  • 1.34078165372485 bayes_pls_golite062009
  • protein binding
  • 1.12215421354121 bayes_pls_golite062009
  • transcription factor activity
  • 0.873765500321315 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.591700155096213 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.383589644462932 bayes_pls_golite062009
    2
    Term Confidence Notes
  • 6.40066880991253 bayes_pls_golite062009
  • RNA binding
  • 6.32219487559982 bayes_pls_golite062009
  • mRNA binding
  • 4.87640532914983 bayes_pls_golite062009
  • nucleic acid binding
  • 4.65259034341669 bayes_pls_golite062009
  • U1 snRNA binding
  • 3.93490468939017 bayes_pls_golite062009
  • snRNA binding
  • 3.77997752511163 bayes_pls_golite062009
  • binding
  • 3.48033873254013 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 2.7133834347239 bayes_pls_golite062009
  • single-stranded RNA binding
  • 2.55628738360472 bayes_pls_golite062009
  • transcription regulator activity
  • 2.2045206027152 bayes_pls_golite062009
  • DNA binding
  • 1.80828042019548 bayes_pls_golite062009
  • structural molecule activity
  • 1.57342338925793 bayes_pls_golite062009
  • U2 snRNA binding
  • 1.09350203162237 bayes_pls_golite062009
  • protein binding
  • 1.05805521997665 bayes_pls_golite062009
  • transcription factor activity
  • 0.894914712180715 bayes_pls_golite062009
  • sequence-specific DNA binding
  • 0.327072171076297 bayes_pls_golite062009
  • mRNA 3'-UTR binding
  • 0.229644510503376 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.27

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle