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Protein Overview: ATPsyn-d-PA, ATP...

General Information:
Name(s) found: FBpp0311983 [FlyBase]
ATPsyn-d-PA / FBpp0083142 [FlyBase]
ATPsyn-d-PB / FBpp0083141 [FlyBase]
Description(s) found:
Found 43 descriptions.
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  • type=protein; loc=3R:14921131..14921667; ID=FBpp0311983; name=ATPsyn-d-PC; parent=FBgn0016120,FBtr0346155; dbxref=FlyBase:FBpp0311983,FlyBase_Annotation_IDs:CG6030-PC; MD5=4c219e22ca9e6524cc08e858fd05becc; length=178; release=r5.56; species=Dmel; [FlyBase]
  • The gene ATP synthase, subunit d is referred to in FlyBase by the symbol Dmel\ATPsyn-d (CG6030, FBgn0016120). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14920720..14921792. It has the cytological map location 91F1. Based on sequence similarity, it is predicted to have molecular function</span>: hydrogen-exporting ATPase activity, phosphorylative mechanism. Based on sequence similarity, it is predicted to be involved in the biological process</span>: proton transport. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene ATP synthase, subunit d is referred to in FlyBase by the symbol Dmel\ATPsyn-d (CG6030, FBgn0016120). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14920720..14921792. It has the cytological map location 91F1. Based on sequence similarity, it is predicted to have molecular function</span>: hydrogen-exporting ATPase activity, phosphorylative mechanism. Based on sequence similarity, it is predicted to be involved in the biological process</span>: proton transport. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 178 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [ISS]
    lipid particle [IDA]
    Biological Process: proton transport [ISS]
    ATP synthesis coupled proton transport [IEA]
    Molecular Function: hydrogen-exporting ATPase activity, phosphorylative mechanism [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARRIAQSS INWSALAERV PANQKSSFGA FKTKSDIYVR AVLANPECPP QIDWANYKKL  60
   61 VPVAGLVDSF QKQYEALKVP YPQDKVSSQV DAEIKASQSE IDAYKKASEQ RIQNYQKEIA 120
  121 HLKSLLPYDQ MTMEDYRDAF PDSALDPLNK PTFWPHTPEE QVGYKSKEQL EAEAQGHH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] PSI-BLAST 67.0 No description for 2clyB was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrogen ion transmembrane transporter activity
    		•  10.7183160834782 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  8.97596713760839 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.90597892679083 bayes_pls_golite062009
  • hydrogen-exporting ATPase activity, phosphorylative mechanism
    		•  6.1125687610116 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.22395118867988 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.14778831333857 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.77987144158593 bayes_pls_golite062009
  • transporter activity
    		•  2.17343635031853 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.0392528625188 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.96541207125766 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism
    		•  1.93539847256373 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  1.72052571762598 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.46705756526037 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.40154328896132 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.38474091052441 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.38237845949685 bayes_pls_golite062009
  • ATPase activity
    		•  1.3807805914732 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.799499441674651 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.793051451246261 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.769001631826172 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.763828049556794 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.760339273021048 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.760299009322944 bayes_pls_golite062009
  • catalytic activity
    		•  0.534516847146079 bayes_pls_golite062009
  • hydrolase activity
    		•  0.463638383758448 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  0.334578049419841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle