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Protein Overview: FBpp0082058

General Information:
Name(s) found: FBpp0082058 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • type=protein; loc=3R:join(8239879..8240008,8240074..8240478,8240593..8242304,8242370..8242851,8242940..8243114,8243170..8243697,8243763..8245703,8245762..8245897,8245952..8246148,8246222..8246384,8246448..8246629); ID=FBpp0082058; name=pps-PA; parent=FBgn0082831,FBtr0082586; dbxref=REFSEQ:NP_650193,GB_protein:AAF54807,FlyBase_Annotation_IDs:CG6525-PA,FlyBase:FBpp0290845,FlyMine:FBpp0082058,modMine:FBpp0082058; MD5=5a8c244990624e3557221f90c8643525; length=2016; release=r5.56; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 2016 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: RNA splicing [IMP]
    transcription [IEA]
    regulation of transcription [ISS]
    Molecular Function: transcription factor activity [ISS]
    zinc ion binding [IEA]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSVFTEAP SARPAAAEAD SNLVVVYSKS GISFDERAIG NIMEEKSIST ISVVRITSPT  60
   61 PSMVDQEEDE RLEELANFME TATDSELDSD NGSQSGGDNA SEMDEHDEEN HNTGDDNNSD 120
  121 STETEADAPR TRKRVGRKPK AIKKRKRRKP KERPQIVGLR VEQFYADNTA DMVVKNALKL 180
  181 AGVSVYKRTA ETDALMEVIR NDHNYTPFTS PEQLKNHKRD EKMAMEMQAQ SRKIIMQAPG 240
  241 SVKLINAKKR VQAIPLSPVQ VKVQRLPVKP HQVQQAAQLQ PKVQLIRKPI HSPLPRQKPE 300
  301 IIANNSVNAR LRPTRAPVKV IAPPVQEYIE DDDDAQSSDS AEEENADKAY DSEEMSEESD 360
  361 EFQESDNDRD SDMDFDMRHS NRRNPNKRKR VRKVVRQTPS KPMKPLPPPP TTPQHFPELK 420
  421 KRKEVLEPKA PQIGQIIQMP ATKSVPAVFA LGRGLPSTSF LKIRPTHQSL PVKRPPLPTT 480
  481 PANSNVRRMP AVQLGRIVNS PQEVKEIIIN KNMASPKGVF TNLNTLLGED NNAATKSSPV 540
  541 PLRHRAVMSP STPRSSYNQQ MSPIVVPVPA QAHTPSKGFM PIGVDTAQSH KLPAQIVIET 600
  601 HQSSSELAAE NDKQLDLINS IVQDELLKST LVEQPVVNAD EDIPKLVKML ESTAADLDPP 660
  661 PVSLPTNIFP APEMQGVGNA AAADPNNIMD TANEDEITAD FLQHVVGLIE EDKQFEAEVV 720
  721 KQVLASTEPG TLDAIVSMPT SIEPVDVPQA HTNLLPNASL TEPAQSMTSL PIACSTPSRS 780
  781 VAASTPPTSA KVVRGYGRVI YLPPIEAPTT RAKRRAQFPS APGMAATSSS DAGNLSFGES 840
  841 SLDASINQPL NTSSLSNDSQ PGSGPKRPNP REPSMARRST APRRSKKLDA SQNNDPDASE 900
  901 SQEDDDDPNK LWCICRQPHN NRFMICCDLC EDWFHGTCVG VTKAMGTDME NKGIDWKCPK 960
  961 CVKRQEERSQ PRITDMLVTR PTTQPEQRPS ETKVLTTTAE IVQVAAPSAP RRTLPVVLTV1020
 1021 ASSPMRIPMA KPAKKFPTGA ISHQQQQQLN FIRLGPSPGK RISETLCVVC KRPASTSSVY1080
 1081 CGEECIRKYA QSAIQAHAAT KGPLPQNAGA QSLLNNSFDA KKNKKKDLFE DVLRQADTVS1140
 1141 KVERINVFER KSGRVITGHM APSAHQFRKW LQENPSFEVL PSGTVQSADA EKRLLKGAPE1200
 1201 AATSTSEPAV LGVAKKPPEG PAKLSHPQNT TVQASHQLGI SSVRPLAKKD KEKTTPTVQA1260
 1261 PTPNRIAAGK PEPVRIGIRR SLREQLLARI KEAQAAEENS GQPTTQWPTV LEVDQFVKNV1320
 1321 ELEMFNSFGR DVGAKYKAKY RSLMFNIKDR KNRTLFEKIC AKQVEPRQLV RMTPEQLASQ1380
 1381 ELAKWREEEN RHQLDMIKKS ELDLLACAQN YVVKTHKGEE VIATKVDVTL PEENVSEASS1440
 1441 MADTKQTSLV SEPSTSTLER STSREKAGSS KEKRHKSHKH HHRKRSRSRS NSRGRSVDKR1500
 1501 HRRQHNEGGE QPGSGEREHR SREKQSRERD EIVPSPLPKK RDENDQSPVP KKTAEKKTEA1560
 1561 SAYNLVDQIL ESEKTVEQAA NLGKPKPSPK PLPTLPSSLK APEPMDNYSR YLHGLTTSSL1620
 1621 WSGTLKMIDL ADFEIVMYPV QGNCHQLGNL MPSQMDVIGR ITRVNVWEYI KKLKKSPTKE1680
 1681 VVIVNIFPAS PSETYKFDLF FEYLDSRQRL GVLGVDSDQI RDFYIFPLGS GDKLPPALQT1740
 1741 AEPVPFYEEA QRPNTLLGII VRCLSKRPAD AVPSTPSVPT PVPALSSKVA KRSRSSISYP1800
 1801 AQSSPKRKIS THSTSSKDDE FDIDAIIKAP IAKLQKTAPK VVPQPSVPND ADEPYSPGGS1860
 1861 DDELVPSAPQ RPNDLERQVN EINKQIAAQQ MEIAGLLKVE PTGSASSSNV LAAISIPANL1920
 1921 SKILASIKDK TNLPSSADDG DEEYNPEDDI TATSSFASKK PRSKGRLAHL SEAELLSMVP1980
 1981 DNLAGVIPRS SRTRHQLAQS PLTPTPLPPP PPPPGV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..207] deduced N/A No confident structure predictions are available.
    2 View Details [208..362] MSA 3.214992 View MSA. No confident structure predictions are available.
    3 View Details [363..460] deduced N/A No confident structure predictions are available.
    4 View Details [461..665] deduced N/A No confident structure predictions are available.
    5 View Details [666..900] deduced N/A No confident structure predictions are available.
    6 View Details [901..1040] FFAS03 1.12 Solution structure of PHD domain in death inducer-obliterator 1(DIO-1)
    7 View Details [1041..1263] deduced N/A No confident structure predictions are available.
    8 View Details [1264..1407] FFAS03 1.23 No description for 2dmeA was found.
    9 View Details [1408..1558] deduced N/A No confident structure predictions are available.
    10 View Details [1559..1705] deduced N/A No confident structure predictions are available.
    11 View Details [1706..1839] deduced N/A No confident structure predictions are available.
    12 View Details [1840..2016] MSA 2.098994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6
    Term Confidence Notes
  • transcription regulator activity
    		•  2.84543733401722 bayes_pls_golite062009
  • binding
    		•  2.84147289283175 bayes_pls_golite062009
  • DNA binding
    		•  2.61461572393763 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.28792441212246 bayes_pls_golite062009
  • transcription factor activity
    		•  1.59046392323038 bayes_pls_golite062009
  • protein binding
    		•  1.32925779020231 bayes_pls_golite062009
  • transcription activator activity
    		•  0.663225694514289 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.424927150874777 bayes_pls_golite062009
  • chromatin binding
    		•  0.0738512588250226 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0471610688739243 bayes_pls_golite062009
  • histone binding
    		•  0.0304481539733681 bayes_pls_golite062009
  • transcription factor binding
    		•  0.0293954104210474 bayes_pls_golite062009
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.
    11 No functions predicted.
    12 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle