| Protein: | FBpp0082058 |
| Organism: | Drosophila melanogaster |
| Length: | 2016 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0082058.
| Description | E-value | Query Range |
Subject Range |
|
|
612.0 | [0..11] | [1968..84] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MSSSVFTEAP SARPAAAEAD SNLVVVYSKS GISFDERAIG NIMEEKSIST ISVVRITSPT 60
61 PSMVDQEEDE RLEELANFME TATDSELDSD NGSQSGGDNA SEMDEHDEEN HNTGDDNNSD 120
121 STETEADAPR TRKRVGRKPK AIKKRKRRKP KERPQIVGLR VEQFYADNTA DMVVKNALKL 180
181 AGVSVYKRTA ETDALMEVIR NDHNYTP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [208-362] |
1 11 21 31 41 51
| | | | | |
1 FTSPEQLKNH KRDEKMAMEM QAQSRKIIMQ APGSVKLINA KKRVQAIPLS PVQVKVQRLP 60
61 VKPHQVQQAA QLQPKVQLIR KPIHSPLPRQ KPEIIANNSV NARLRPTRAP VKVIAPPVQE 120
121 YIEDDDDAQS SDSAEEENAD KAYDSEEMSE ESDEF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [363-460] |
1 11 21 31 41 51
| | | | | |
1 QESDNDRDSD MDFDMRHSNR RNPNKRKRVR KVVRQTPSKP MKPLPPPPTT PQHFPELKKR 60
61 KEVLEPKAPQ IGQIIQMPAT KSVPAVFALG RGLPSTSF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [461-665] |
1 11 21 31 41 51
| | | | | |
1 LKIRPTHQSL PVKRPPLPTT PANSNVRRMP AVQLGRIVNS PQEVKEIIIN KNMASPKGVF 60
61 TNLNTLLGED NNAATKSSPV PLRHRAVMSP STPRSSYNQQ MSPIVVPVPA QAHTPSKGFM 120
121 PIGVDTAQSH KLPAQIVIET HQSSSELAAE NDKQLDLINS IVQDELLKST LVEQPVVNAD 180
181 EDIPKLVKML ESTAADLDPP PVSLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [666-900] |
1 11 21 31 41 51
| | | | | |
1 TNIFPAPEMQ GVGNAAAADP NNIMDTANED EITADFLQHV VGLIEEDKQF EAEVVKQVLA 60
61 STEPGTLDAI VSMPTSIEPV DVPQAHTNLL PNASLTEPAQ SMTSLPIACS TPSRSVAAST 120
121 PPTSAKVVRG YGRVIYLPPI EAPTTRAKRR AQFPSAPGMA ATSSSDAGNL SFGESSLDAS 180
181 INQPLNTSSL SNDSQPGSGP KRPNPREPSM ARRSTAPRRS KKLDASQNND PDASE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [901-1040] |
1 11 21 31 41 51
| | | | | |
1 SQEDDDDPNK LWCICRQPHN NRFMICCDLC EDWFHGTCVG VTKAMGTDME NKGIDWKCPK 60
61 CVKRQEERSQ PRITDMLVTR PTTQPEQRPS ETKVLTTTAE IVQVAAPSAP RRTLPVVLTV 120
121 ASSPMRIPMA KPAKKFPTGA
|
| Detection Method: | |
| Confidence: | 1.12 |
| Match: | 1wemA |
| Description: | Solution structure of PHD domain in death inducer-obliterator 1(DIO-1) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 2.84543733401722 | bayes_pls_golite062009 |
| binding | 2.84147289283175 | bayes_pls_golite062009 |
| DNA binding | 2.61461572393763 | bayes_pls_golite062009 |
| nucleic acid binding | 2.28792441212246 | bayes_pls_golite062009 |
| transcription factor activity | 1.59046392323038 | bayes_pls_golite062009 |
| protein binding | 1.32925779020231 | bayes_pls_golite062009 |
| transcription activator activity | 0.663225694514289 | bayes_pls_golite062009 |
| transcription repressor activity | 0.424927150874777 | bayes_pls_golite062009 |
| chromatin binding | 0.0738512588250226 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0471610688739243 | bayes_pls_golite062009 |
| histone binding | 0.0304481539733681 | bayes_pls_golite062009 |
| transcription factor binding | 0.0293954104210474 | bayes_pls_golite062009 |
|
Region A: Residues: [1041-1263] |
1 11 21 31 41 51
| | | | | |
1 ISHQQQQQLN FIRLGPSPGK RISETLCVVC KRPASTSSVY CGEECIRKYA QSAIQAHAAT 60
61 KGPLPQNAGA QSLLNNSFDA KKNKKKDLFE DVLRQADTVS KVERINVFER KSGRVITGHM 120
121 APSAHQFRKW LQENPSFEVL PSGTVQSADA EKRLLKGAPE AATSTSEPAV LGVAKKPPEG 180
181 PAKLSHPQNT TVQASHQLGI SSVRPLAKKD KEKTTPTVQA PTP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1264-1407] |
1 11 21 31 41 51
| | | | | |
1 NRIAAGKPEP VRIGIRRSLR EQLLARIKEA QAAEENSGQP TTQWPTVLEV DQFVKNVELE 60
61 MFNSFGRDVG AKYKAKYRSL MFNIKDRKNR TLFEKICAKQ VEPRQLVRMT PEQLASQELA 120
121 KWREEENRHQ LDMIKKSELD LLAC
|
| Detection Method: | |
| Confidence: | 1.23 |
| Match: | 2dmeA |
| Description: | No description for 2dmeA was found. |
|
Region A: Residues: [1408-1558] |
1 11 21 31 41 51
| | | | | |
1 AQNYVVKTHK GEEVIATKVD VTLPEENVSE ASSMADTKQT SLVSEPSTST LERSTSREKA 60
61 GSSKEKRHKS HKHHHRKRSR SRSNSRGRSV DKRHRRQHNE GGEQPGSGER EHRSREKQSR 120
121 ERDEIVPSPL PKKRDENDQS PVPKKTAEKK T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1559-1705] |
1 11 21 31 41 51
| | | | | |
1 EASAYNLVDQ ILESEKTVEQ AANLGKPKPS PKPLPTLPSS LKAPEPMDNY SRYLHGLTTS 60
61 SLWSGTLKMI DLADFEIVMY PVQGNCHQLG NLMPSQMDVI GRITRVNVWE YIKKLKKSPT 120
121 KEVVIVNIFP ASPSETYKFD LFFEYLD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1706-1839] |
1 11 21 31 41 51
| | | | | |
1 SRQRLGVLGV DSDQIRDFYI FPLGSGDKLP PALQTAEPVP FYEEAQRPNT LLGIIVRCLS 60
61 KRPADAVPST PSVPTPVPAL SSKVAKRSRS SISYPAQSSP KRKISTHSTS SKDDEFDIDA 120
121 IIKAPIAKLQ KTAP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1840-2016] |
1 11 21 31 41 51
| | | | | |
1 KVVPQPSVPN DADEPYSPGG SDDELVPSAP QRPNDLERQV NEINKQIAAQ QMEIAGLLKV 60
61 EPTGSASSSN VLAAISIPAN LSKILASIKD KTNLPSSADD GDEEYNPEDD ITATSSFASK 120
121 KPRSKGRLAH LSEAELLSMV PDNLAGVIPR SSRTRHQLAQ SPLTPTPLPP PPPPPGV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
