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Protein Overview: gi|24645494, gi|...

General Information:
Name(s) found: gi|7299244 [NCBI NR]
gi|24645494 [NCBI NR]
Description(s) found:
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  • gi|7299244|gb|AAF54440.1| Rpt3R, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|24645494|ref|NP_649938.1| Rpt3R, isoform A [Drosophila melanogaster] [NCBI NR]
  • >CG9475-PA translation from_gene[CG9475 CG9475 FBgn0037742] seq_release:3 mol_weight=47629 cds_boundaries:(3R:5,580,639..5,581,901[-]) aa_length:421 transcript_info:[CG9475-RA seq_release:3] gene_info:[gene symbol:CG9475 FBgn0037742 gene_boundaries:(3R [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VH79) CG9475 protein [DrosMelano7227.FASTAC.txt]
  • (AE003684) CG9475 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG9475-PA, isoform A [Drosophila melanogaster]gi|24645494|ref|NP_649938.1| CG9475-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(5580620..5581885); ID=FBpp0081642; name=Rpt3R-PA; parent=FBgn0037742,FBtr0082164; dbxref=FlyBase:FBpp0081642,FlyBase_Annotation_IDs:CG9475-PA,GB_protein:AAF54440.1,REFSEQ:NP_649938,GB_protein:AAF54440; MD5=234c8e2dc17302172 [fly-100309-contam.fasta]
  • Rpt3R CG9475-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG9475-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(5580620..5581885); ID=FBpp0081642; name=Rpt3R-PA; parent=FBgn0037742,FBtr0082164; dbxref=FlyBase:FBpp0081642,FlyBase_Annotation_IDs:CG9475-PA,GB_protein:AAF54440.1,REFSEQ:NP_649938,GB_protein:AAF54440; MD5=234c8e2dc17302172019831472b7315a; length=421; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
    • Organism: Drosophila melanogaster
    Length: 421 amino acids

    Gene Ontology:
    Cellular Component: proteasome regulatory particle, base subcomplex [ISS]
    cytoplasm [IEA]
    proteasome complex [NAS]
    Biological Process: proteolysis [ISS]
    response to DNA damage stimulus [IMP]
    Molecular Function: ATPase activity [ISS]
    ATP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLKEEIAQ FHEQSLEKYD GLDPHDLYVL YKKLQMELEL IQVQEDYIKE EQRNLKKEFI  60
   61 HAQEEVKRIK AVPLVIGQFL EAVDENNGIV ASTTGSNYYV RVLSTIDREQ LKPSSSVGLH 120
  121 KQSNCLVDLV PPEADSTISM LSPDEKPDIS YSDIGGLDIQ KQEIREAVEL PLTHAQLYKQ 180
  181 IGGYSQYQKT ISTNSLPGID PPRGVLLFGP PGCGKTMLAK AVAHHTTASF IRVVGSEFVQ 240
  241 KYLGEGPRMV RDLFRLAKQN SPSIIFIDEI DAIATKRFDA QTGADREVQR ILLELLNQMD 300
  301 GFDETTNIKV IMATNRADTL DPALLRPGRL DRKIELPLPD RRQKRLVFTT ITSKMNVGED 360
  361 VDLEDIIARP DKISNADINA ICQEAGMHAV RENRYVVNAK DFEKGYKTSV RKDEAQHEFY 420
  421 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..421] PSI-BLAST 81.045757 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle