YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|24645494, gi|...
Organism: Drosophila melanogaster
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24645494, gi|....

Description E-value Query
Range
Subject
Range
gi|75260106 - gi|75260106|ref|ZP_00731384.1| COG0465: ATP-dependent Zn proteases [Escherichia coli E22]
338.0 [0..7] [421..5]

Back

Predicted Domain #1
Region A:
Residues: [1-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLKEEIAQ FHEQSLEKYD GLDPHDLYVL YKKLQMELEL IQVQEDYIKE EQRNLKKEFI  60
   61 HAQEEVKRIK AVPLVIGQFL EAVDENNGIV ASTTGSNYYV RVLSTIDREQ LKPSSSVGLH 120
  121 KQSNCLVDLV PPEADSTISM LSPDEKPDIS YSDIGGLDIQ KQEIREAVEL PLTHAQLYKQ 180
  181 IGGYSQYQKT ISTNSLPGID PPRGVLLFGP PGCGKTMLAK AVAHHTTASF IRVVGSEFVQ 240
  241 KYLGEGPRMV RDLFRLAKQN SPSIIFIDEI DAIATKRFDA QTGADREVQR ILLELLNQMD 300
  301 GFDETTNIKV IMATNRADTL DPALLRPGRL DRKIELPLPD RRQKRLVFTT ITSKMNVGED 360
  361 VDLEDIIARP DKISNADINA ICQEAGMHAV RENRYVVNAK DFEKGYKTSV RKDEAQHEFY 420
  421 S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.045757
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle