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Protein Overview: FBpp0310716, FBp...

General Information:
Name(s) found: FBpp0310716 [FlyBase]
FBpp0306391 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=3R:join(1083287..1083843,1092475..1092754,1092843..1092923,1092985..1093124,1093184..1093562); ID=FBpp0310716; name=Hph-PD; parent=FBgn0264785,FBtr0344333; dbxref=FlyBase:FBpp0310716,FlyBase_Annotation_IDs:CG44015-PD; MD5=655d61da5590f038af0d0c07a4c34a5a; length=478; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:join(1083287..1083843,1092475..1092754,1092843..1092923,1092985..1093124,1093184..1093562); ID=FBpp0306391; name=Hph-PC; parent=FBgn0264785,FBtr0334276; dbxref=FlyBase:FBpp0306391,FlyBase_Annotation_IDs:CG44015-PC,REFSEQ:NP_730906,GB_protein:AAF52052; MD5=655d61da5590f038af0d0c07a4c34a5a; length=478; release=r5.56; species=Dmel; [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 478 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to hypoxia [IMP]
    protein localization [IMP]
    oxidation reduction [IEA]
    response to DNA damage stimulus [IMP]
    open tracheal system development [NAS]
    Molecular Function: L-ascorbic acid binding [IEA]
    zinc ion binding [IEA]
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [IEA]
    iron ion binding [IEA]
    peptidyl-proline 4-dioxygenase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRGRGKVRD SASHSGSHSA SKSAMDPPRC SICGTQQQLL RCAKCKAVYY CSPAHQHLHW  60
   61 PDHRTECRLL TRQKLNSSNN NKQQQRQQIQ QLQQAVASAN LECSGAGANC STAQMMTPAH 120
  121 QAQSWPAEVD NLLNLLGQPG SQEKAAAAET ETGQRQQQHQ HHHHNGEKSS SYQIGLADAS 180
  181 FMGSGSERRY EDLCRNIISD MNQYGLSVVD DFLGMETGLK ILNEVRSMYN AGAFQDGQVV 240
  241 TNQTPDAPAV RGDKIRGDKI KWVGGNEPGC SNVWYLTNQI DSVVYRVNTM KDNGILGNYH 300
  301 IRERTRAMVA CYPGSGTHYV MHVDNPQKDG RVITAIYYLN INWDARESGG ILRIRPTPGT 360
  361 TVADIEPKFD RLIFFWSDIR NPHEVQPAHR TRYAITVWYF DAKEREEALI RAKLENSKTN 420
  421 NLAAQAQAQQ AEPDSTTTPP AAPASSASSL PVSMSTGTGA LNANVSSNSC ATSSEICT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] PSI-BLAST 10.30103 No description for 2d8qA was found.
    2 View Details [77..166] FFAS03 1.01 No description for 2imlA was found.
    3 View Details [167..478] PSI-BLAST 59.045757 No description for 2hbtA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  0.928118600984694 bayes_pls_golite062009
  • binding
    		•  0.708310330009993 bayes_pls_golite062009
  • DNA binding
    		•  0.479586778468638 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.360410511825635 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle