YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0310716, FBp...
Organism: Drosophila melanogaster
Length: 478 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310716, FBp....

Description E-value Query
Range
Subject
Range
gi|54639144, gi|... - gi|54639144|gb|EAL28546.1| GA16313-PA [Drosophila pseudoobscura], gi|125776808|ref|XP_001359400.1| G...
295.0 [0..25] [478..1]

Back

Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRGRGKVRD SASHSGSHSA SKSAMDPPRC SICGTQQQLL RCAKCKAVYY CSPAHQHLHW  60
   61 PDHRTECRLL TRQKLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 2d8qA
Description: No description for 2d8qA was found.

Predicted functions:

Term Confidence Notes
transcription regulator activity 0.928118600984694 bayes_pls_golite062009
binding 0.708310330009993 bayes_pls_golite062009
DNA binding 0.479586778468638 bayes_pls_golite062009
nucleic acid binding 0.360410511825635 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [77-166]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSNNNKQQQR QQIQQLQQAV ASANLECSGA GANCSTAQMM TPAHQAQSWP AEVDNLLNLL  60
   61 GQPGSQEKAA AAETETGQRQ QQHQHHHHNG 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 2imlA
Description: No description for 2imlA was found.

Predicted Domain #3
Region A:
Residues: [167-478]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKSSSYQIGL ADASFMGSGS ERRYEDLCRN IISDMNQYGL SVVDDFLGME TGLKILNEVR  60
   61 SMYNAGAFQD GQVVTNQTPD APAVRGDKIR GDKIKWVGGN EPGCSNVWYL TNQIDSVVYR 120
  121 VNTMKDNGIL GNYHIRERTR AMVACYPGSG THYVMHVDNP QKDGRVITAI YYLNINWDAR 180
  181 ESGGILRIRP TPGTTVADIE PKFDRLIFFW SDIRNPHEVQ PAHRTRYAIT VWYFDAKERE 240
  241 EALIRAKLEN SKTNNLAAQA QAQQAEPDST TTPPAAPASS ASSLPVSMST GTGALNANVS 300
  301 SNSCATSSEI CT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.045757
Match: 2hbtA
Description: No description for 2hbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle