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Protein Overview: CG5398-PA

General Information:
Name(s) found: CG5398-PA / FBpp0071980 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5398 (CG5398, FBgn0034882). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:19490108..19491164. It has the cytological map location 59F4. Based on sequence similarity, it is predicted to have molecular function</span>: water channel activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transmembrane transport. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 238 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [ISS]
    Biological Process: transmembrane transport [ISS]
    Molecular Function: channel activity [ISS]
    water channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWDFFTFIR GATEFSATAL LILLGCMGDS TNQGGESKFL VASVHYGLTV MVVMHVFGFV  60
   61 SGAHSNPCIS ISCYLMGYIA LEVMMMYVVC QMAGAFLGYF LLMQLLPKEL VDKSKPGICL 120
  121 VQPMDTLSTY QVVIIECLLT AVLVLGWCSL WDVRNGRFLD SVAIRMGLLV IACSFAGIQL 180
  181 TGASMNPAKT LVPAIFYGSP NSVLMQLTGQ ILAAIMVPFV WNHAYTPPYK PLEIPVCN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] PSI-BLAST 54.69897 Double layered 2D crystal structure of AQUAPORIN-4 (AQP4M23) at 3.2 a resolution by electron crystallography


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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