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Protein Overview: SmD3-PA

General Information:
Name(s) found: SmD3-PA / FBpp0087094 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • The gene Small ribonucleoprotein Sm D3 is referred to in FlyBase by the symbol Dmel\SmD3 (CG8427, FBgn0023167). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:8056231..8057514. It has the cytological map location 48E4. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: central nervous system development; mitotic spindle organization; neuron differentiation; muscle organ development; lymph gland development; peripheral nervous system development. 17 alleles are reported. The phenotypes of these alleles are annotated with 14 unique terms, many of which group under: organ system; nervous system; anatomical structure; embryonic nervous system; thoracic segment; imaginal precursor; larval thorax; dorsal thoracic disc; peripheral nervous system; adult segment. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 151 amino acids

    Gene Ontology:
    Cellular Component: nucleus [NAS]
    catalytic step 2 spliceosome [IDA]
    precatalytic spliceosome [IDA]
    spliceosomal complex [ISS]
    small nuclear ribonucleoprotein complex [ISS][NAS][TAS]
    Biological Process: muscle organ development [IMP]
    central nervous system development [IMP]
    neuron differentiation [IMP]
    lymph gland development [IMP]
    mitotic spindle organization [IMP]
    peripheral nervous system development [IMP][NAS]
    nuclear mRNA splicing, via spliceosome [IC][ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIGVPIKVL HEAEGHIITC ETITGEVYRG KLIEAEDNMN CQMTQITVTY RDGRTANLEN  60
   61 VYIRGSKIRF LILPDMLKNA PMFKKQTGKG LGGTAGRGKA AILRAQARGR GRGGPPGGGR 120
  121 GTGGPPGAPG GSGGRGAWQG GPTGGRGRGG L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] PSI-BLAST 18.69897 D3 core SNRNP protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle