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Protein Overview: CSN7-PA

General Information:
Name(s) found: CSN7-PA / FBpp0087821 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene COP9 complex homolog subunit 7 is referred to in FlyBase by the symbol Dmel\CSN7 (CG2038, FBgn0028836). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:4308493..4316089. It has the cytological map location 44C6. There is experimental evidence that it has the molecular function</span>: protein binding. There is experimental evidence that it is involved in the biological process</span>: protein stabilization. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: signalosome [IDA][IPI][ISS]
    Biological Process: protein stabilization [IMP]
    Molecular Function: protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQDMLLGNE EPSKSKETFL EKFCVLAKSS TGAALLDVIR QALEAPNVFV FGELLAEPSV  60
   61 LQLKDGPDSK HFETLNLFAY GTYKEYRAQP EKFIELTPAM QKKLQHLTIV SLAIKAKSIP 120
  121 YALLLSELEI DNVRHLEDII IEAIYADIIH GKLFQNTRIL EVDYAQGRDI PPGYTGQIVE 180
  181 TLQAWVNSCD SVSNCIEMQI KYANAEKSKR LINKERVEQD LINLKKVLKS QTSDSDESMQ 240
  241 IDTHGPGTSG GLGQSELRKK PSKLRNPRSA AVGLKFSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] deduced N/A No confident structure predictions are available.
    2 View Details [102..170] PSI-BLAST 4.39794 Solution structure of the PCI domain
    3 View Details [171..278] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  5.09178084244715 bayes_pls_golite062009
  • DNA binding
    		•  4.69269372393889 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.59221092058767 bayes_pls_golite062009
  • binding
    		•  4.100002699956 bayes_pls_golite062009
  • transcription factor activity
    		•  4.01234546864709 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  2.23304004014963 bayes_pls_golite062009
  • transcription activator activity
    		•  2.21230033124772 bayes_pls_golite062009
  • transcription repressor activity
    		•  2.09951094757211 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  1.40206639526766 bayes_pls_golite062009
  • transcription factor binding
    		•  0.78051974537344 bayes_pls_golite062009
  • protein binding
    		•  0.653872239015235 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle