| Protein: | CSN7-PA |
| Organism: | Drosophila melanogaster |
| Length: | 278 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN7-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..6] | [270..244] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MTQDMLLGNE EPSKSKETFL EKFCVLAKSS TGAALLDVIR QALEAPNVFV FGELLAEPSV 60
61 LQLKDGPDSK HFETLNLFAY GTYKEYRAQP EKFIELTPAM Q
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-170] |
1 11 21 31 41 51
| | | | | |
1 KKLQHLTIVS LAIKAKSIPY ALLLSELEID NVRHLEDIII EAIYADIIHG KLFQNTRILE 60
61 VDYAQGRDI
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 5.09178084244715 | bayes_pls_golite062009 |
| DNA binding | 4.69269372393889 | bayes_pls_golite062009 |
| nucleic acid binding | 4.59221092058767 | bayes_pls_golite062009 |
| binding | 4.100002699956 | bayes_pls_golite062009 |
| transcription factor activity | 4.01234546864709 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.23304004014963 | bayes_pls_golite062009 |
| transcription activator activity | 2.21230033124772 | bayes_pls_golite062009 |
| transcription repressor activity | 2.09951094757211 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 1.40206639526766 | bayes_pls_golite062009 |
| transcription factor binding | 0.78051974537344 | bayes_pls_golite062009 |
| protein binding | 0.653872239015235 | bayes_pls_golite062009 |
|
Region A: Residues: [171-278] |
1 11 21 31 41 51
| | | | | |
1 PPGYTGQIVE TLQAWVNSCD SVSNCIEMQI KYANAEKSKR LINKERVEQD LINLKKVLKS 60
61 QTSDSDESMQ IDTHGPGTSG GLGQSELRKK PSKLRNPRSA AVGLKFSK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
