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Protein Overview: CG30499-PA, FBpp...

General Information:
Name(s) found: FBpp0301728 [FlyBase]
CG30499-PA / FBpp0088028 [FlyBase]
Description(s) found:
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  • gi|24586301|ref|NP_610298.2| CG30499 [Drosophila melanogaster] [NCBI NR]
  • gi|21645589|gb|AAM71098.1| CG30499 [Drosophila melanogaster] [NCBI NR]
  • gi|16768878|gb|AAL28658.1| LD09559p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0301729; name=CG30499-PC; parent=FBgn0050499,FBtr0310026; dbxref=FlyBase:FBpp0301729,FlyBase_Annotation_IDs:CG30499-PC; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.43; species=Dmel; [FlyBase]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0301728; name=CG30499-PB; parent=FBgn0050499,FBtr0310025; dbxref=FlyBase:FBpp0301728,FlyBase_Annotation_IDs:CG30499-PB,REFSEQ:NP_001260780,GB_protein:AGB93313; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG30499 (CG30499, FBgn0050499). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3451937..3453254. It has the cytological map location 43D7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: ribulose-phosphate 3-epimerase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: carbohydrate metabolic process. 4 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG30499-PA translation from_gene[CG30499 CG30499 FBgn0050499] seq_release:3 mol_weight=24228 cds_boundaries:(2R:2,625,465..2,626,385[-]) aa_length:221 transcript_info:[CG30499-RA seq_release:3] gene_info:[gene symbol:CG30499 synonyms:[CG1364] FBgn0050 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q95RV5) LD09559p (CG30499-PA) [DrosMelano7227.FASTAC.txt]
  • CG30499-PA [Drosophila melanogaster]gi|16768878|gb|AAL28658.1| LD09559p [Drosophila melanogaster]gi|24586301|ref|NP_610298.2| CG30499-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_pr [fly-100309-contam.fasta]
  • LD09559p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG30499-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Ribulose-phosphate 3-epimerase OS=Drosophila melanogaster GN=boca PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098,FlyMine:FBpp0088028,modMine:FBpp0088028; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0301728; name=CG30499-PB; parent=FBgn0050499,FBtr0310025; dbxref=FlyBase:FBpp0301728,FlyBase_Annotation_IDs:CG30499-PB; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(3452066..3452362,3452563..3452745,3452804..3452989); ID=FBpp0301729; name=CG30499-PC; parent=FBgn0050499,FBtr0310026; dbxref=FlyBase:FBpp0301729,FlyBase_Annotation_IDs:CG30499-PC; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098,FlyMine:FBpp0088028,modMine:FBpp0088028; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0301728; name=CG30499-PB; parent=FBgn0050499,FBtr0310025; dbxref=FlyBase:FBpp0301728,FlyBase_Annotation_IDs:CG30499-PB,REFSEQ:NP_001260780,GB_protein:AGB93313; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098,FlyMine:FBpp0088028,modMine:FBpp0088028; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0301728; name=CG30499-PB; parent=FBgn0050499,FBtr0310025; dbxref=FlyBase:FBpp0301728,FlyBase_Annotation_IDs:CG30499-PB,REFSEQ:NP_001260780,GB_protein:AGB93313; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Ribulose-phosphate 3-epimerase OS=Drosophila melanogaster GN=CG1364 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0088028 type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098,FlyMine:FBpp0088028,modMine:FBpp0088028; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0301728 type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0301728; name=CG30499-PB; parent=FBgn0050499,FBtr0310025; dbxref=FlyBase:FBpp0301728,FlyBase_Annotation_IDs:CG30499-PB,REFSEQ:NP_001260780,GB_protein:AGB93313; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0088028; name=CG30499-PA; parent=FBgn0050499,FBtr0088954; dbxref=FlyBase:FBpp0088028,FlyBase_Annotation_IDs:CG30499-PA,GB_protein:AAM71098.1,REFSEQ:NP_610298,GB_protein:AAM71098,UniProt/TrEMBL:Q95RV5,FlyMine:FBpp0088028,modMine:FBpp0088028; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=2R:complement(join(7565299..7565484,7565058..7565240,7564561..7564857)); ID=FBpp0301728; name=CG30499-PB; parent=FBgn0050499,FBtr0310025; dbxref=FlyBase:FBpp0301728,FlyBase_Annotation_IDs:CG30499-PB,REFSEQ:NP_001260780,GB_protein:AGB93313,UniProt/TrEMBL:Q95RV5; MD5=769677505cba1b02dcf1b832eabd7890; length=221; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 221 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: ribulose-phosphate 3-epimerase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVQAKIGPS ILNADLSNLA AESQKLLDNG ADYLHLDVMD GTFVPNLTFG HPMVKSLRNK  60
   61 IKTAFFETHM MVQNPEQWIE PMADAGVNLY TFHVEPVQDV VRVSRRVQES GMKVGLAIKP 120
  121 GTEVQDLEKY LSIADVVLVM TVEPGFGGQS FMADMMPKVK WLRENYPNLD IEVDGGVGPK 180
  181 TIHCCAEAGA NMIVSGTAVV GASDQSQVIK ELRDVVHSYL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221] PSI-BLAST 44.154902 D-ribulose-5-phosphate 3-epimerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribulose-phosphate 3-epimerase activity
    		•  3.28372503209224 bayes_pls_golite062009
  • catalytic activity
    		•  2.44231061702877 bayes_pls_golite062009
  • intramolecular oxidoreductase activity
    		•  1.86158562896415 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting aldoses and ketoses
    		•  1.36492964250879 bayes_pls_golite062009
  • isomerase activity
    		•  0.935800409577999 bayes_pls_golite062009
  • racemase and epimerase activity, acting on carbohydrates and derivatives
    		•  0.764608070506109 bayes_pls_golite062009
  • orotidine-5'-phosphate decarboxylase activity
    		•  0.758594564254247 bayes_pls_golite062009
  • binding
    		•  0.595171555788202 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.288948763149344 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.1100847613283 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle